ReviewMammalian genome : official journal of the International Mammalian Genome Society2009
Next-generation sequencing of vertebrate experimental organisms.
Review in Mammalian genome : official journal of the International Mammalian Genome Society, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
20 citing papers in PubMed.
- Application of Pan-Omics Technologies in Research on Important Economic Traits for Ruminants.International journal of molecular sciences · 2024Review
- Reads2Type: a web application for rapid microbial taxonomy identification.BMC bioinformatics · 2015Article
- Label-free DNA sequencing using Millikan detection.Analytical biochemistry · 2015Article
- SNPfisher: tools for probing genetic variation in laboratory-reared zebrafish.Development (Cambridge, England) · 2015Article
- Whole transcriptome analysis using next-generation sequencing of sterile-cultured Eisenia andrei for immune system research.PloS one · 2015Article
- Review
- Next-generation sequencing of experimental mouse strains.Mammalian genome : official journal of the International Mammalian Genome Society · 2012Review
- Sequencing and characterization of the FVB/NJ mouse genome.Genome biology · 2012Article
- Discovery Genetics - The History and Future of Spontaneous Mutation Research.Current protocols in mouse biology · 2012Article
- Next-generation sequencing and large genome assemblies.Pharmacogenomics · 2012Review
- Single-cell and regional gene expression analysis in Alzheimer's disease.Cellular and molecular neurobiology · 2012Review
- Sequencing technologies and genome sequencing.Journal of applied genetics · 2011Review
- Article
- Fast identification and removal of sequence contamination from genomic and metagenomic datasets.PloS one · 2011Article
- Statistical Analyses of Next Generation Sequence Data: A Partial Overview.Journal of proteomics & bioinformatics · 2010Article
- The next-generation sequencing technology and application.Protein & cell · 2010Review
- Using comparative genomic hybridization to survey genomic sequence divergence across species: a proof-of-concept from Drosophila.BMC genomics · 2010Article
- Visualizing genomes: techniques and challenges.Nature methods · 2010Review
- Next-generation gap.Nature methods · 2009Review
- Is sequencing enlightenment ending the dark age of the transcriptome?Nature methods · 2009Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
4 authors.
Funding
Abstract
Next-generation sequencing technologies are revolutionizing biology by allowing for genome-wide transcription factor binding-site profiling, transcriptome sequencing, and more recently, whole-genome resequencing. While it is currently not possible to generate complete de novo assemblies of higher-vertebrate genomes using next-generation sequencing, improvements in sequence read lengths and throughput, coupled with new assembly algorithms for large data sets, will soon make this a reality. These developments will in turn spawn a revolution in how genomic data are used to understand genetics and how model organisms are used for disease gene discovery. This review provides an overview of the current next-generation sequencing platforms and the newest computational tools for the analysis of next-generation sequencing data. We also describe how next-generation sequencing may be applied in the context of vertebrate model organism genetics.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.