Evidence map›Paper›PMID 19448969›Full record

ArticleExtremophiles : life under extreme conditions2009

Transcriptional analysis of the hsp70 gene in a haloarchaeon Natrinema sp. J7 under heat and cold stress.

Hao Zhang, Peng Cui, Lu Lin, Ping Shen, Bing Tang, Yu-Ping Huang

Abstract read
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In one paragraph

Article in Extremophiles : life under extreme conditions, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.3field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. HtrAs are essential for the survival of the haloarchaeonApplied and environmental microbiology · 2024
    Article
  3. Article
  4. Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Hao ZhangWuhan University, People's Republic of China.
Peng Cui
Lu Lin
Ping Shen
Bing Tang
Yu-Ping Huang
Wuhan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although ubiquitous in all haloarchaea, little is known about the transcription and regulation of the haloarchaeal hsp70. The purpose of this study is to investigate the transcription of the haloarchaeal hsp70 gene in Natrinema sp. J7 under the temperature and osmotic stress. The hsp70 gene was found to be both temperature- and osmotic-induced, while the response of hsp70 to cold shock was stronger than that to heat shock. Western blot analysis corroborated the similar results at the level of Hsp70 protein. Northern blot and primer extension analyses indicated that the hsp70 was transcribed into a monocistronic transcript and the thermal stress had no effect on the transcription initiation sites choice. The deletion analyses showed that two putative elements, TATA-box (TTTAAAA) and BRE (AGTAAC) located -27 bp upstream of the transcription initiation site played an essential role for the basal transcription of P( hsp70 ). The results suggested that there are some special regulators of hsp70 gene in Natrinema sp. J7.

Indexed as

Gene Expression Regulation, ArchaealTranscription, GeneticArchaeaBase SequenceBlotting, NorthernCold TemperatureDNA PrimersGene DeletionHot TemperatureHSP70 Heat-Shock ProteinsModels, GeneticMolecular Sequence DataMutationOsmosisReverse Transcriptase Polymerase Chain ReactionDNA PrimersHSP70 Heat-Shock Proteins

Identifiers

PMID19448969
OpenAlexW2075482870

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.