Evidence map›Paper›PMID 19448849›Full record

ArticleJournal of psychiatry & neuroscience : JPN2009

Positive association of the pericentrin (PCNT) gene with major depressive disorder in the Japanese population.

Shusuke Numata, Jun-Ichi Iga, Masahito Nakataki, Shin'ya Tayoshi, Toshihito Tanahashi, Mitsuo Itakura, Shu-Ichi Ueno, Tetsuro Ohmori

Open access · greenAbstract read
In one paragraph

Article in Journal of psychiatry & neuroscience : JPN, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 26 citations in OpenAlex.

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  6. A-kinase anchoring proteins as potential drug targets.British journal of pharmacology · 2012
    Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Pericentrin in cellular function and disease.The Journal of cell biology · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Shusuke NumataDepartment of Psychiatry, Course of Integrated Brain Sciences, Medical Informatics, Institute of Health Biosciences, The University of Tokushima Graduate School, 3-8-15 Kuramoto-cho, Tokushima 770-8503, Japan. shu-numata@umin.ac.jp
Jun-Ichi Iga
Masahito Nakataki
Shin'ya Tayoshi
Toshihito Tanahashi
Mitsuo Itakura
Shu-Ichi Ueno
Tetsuro Ohmori
Tokushima University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPericentrin (PCNT) interacts with disruption-in-schizophrenia 1 (DISC1), a known genetic risk factor for schizophrenia, bipolar disorder and major depressive disorder (MDD). We sought to determine whether the PCNT gene is implicated in MDD.

methodsWe performed case-control association analyses in the Japanese population. We analyzed 9 single nucleotide polymorphisms (SNPs) in 173 patients with MDD and 348 healthy controls.

resultsWe found a significant allelic association between 3 SNPs (rs3788265, rs2073376 and rs2073380) of the PCNT gene and MDD (p = 0.006, 0.005 and 0.021, respectively). After correction for multiple testing, 2 SNPs (rs3788265 and rs2073376) retained significant allelic associations with MDD. In addition, we found a significant association between the 2 marker haplotypes (r3788265 and rs2073376) and MDD (permutation p = 0.011). LIMITATIONS: Our sample was small and comprised only Japanese participants. In addition, owing to the late onset of MDD, it is possible that the disorder will develop in at least some participants in our control group. Finally, we did not show how SNPs of the PCNT gene alter its function.

conclusionOur results suggest that genetic variations in the PCNT gene may play a significant role in the etiology of MDD in the Japanese population.

Indexed as

Polymorphism, Single NucleotideAdolescentAdultAgedAntigensCase-Control StudiesFemaleGene FrequencyHaplotypesHumansJapanLinkage DisequilibriumMajor Depressive DisorderMaleMiddle AgedSequence Analysis, DNAAntigenspericentrin

Identifiers

PMID19448849
PMCPMC2674972
OpenAlexW80311255

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.