Evidence map›Paper›PMID 19448621›Full record

ArticleNature genetics2009

Genome-wide association studies identify loci associated with age at menarche and age at natural menopause.

Chunyan He, Peter Kraft, Constance Chen, Julie E Buring, Guillaume Paré, Susan E Hankinson, Stephen J Chanock, Paul M Ridker, David J Hunter, Daniel I Chasman

Abstract read
In one paragraph

Article in Nature genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 204 papers, 19 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
204citing papers in PubMed, 19 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

204 citing papers in PubMed, 19 syntheses or guidelines pooled it.

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144 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Chunyan HeProgram in Molecular and Genetic Epidemiology, Harvard School of Public Health, Boston, Massachusetts, USA. che@hsph.harvard.edu
Peter Kraft
Constance Chen
Julie E Buring
Guillaume Paré
Susan E Hankinson
Stephen J Chanock
Paul M Ridker
David J Hunter
Daniel I Chasman

Funding

Women's Health Study: Continued Follow-upR01CA047988 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI BURING, JULIE E., LEE, I-MIN · 1991 to 2014
$28.2M
Pharmacogenomics and Risk of Cardiovascular DiseaseU01HL069757 · NHLBI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI KRAUSS, RONALD M · 2001 to 2009
$24.7M
Pharmacogenomics and Risk of Cardiovascular DiseaseU19HL069757 · NHLBI · CHILDREN'S HOSPITAL & RES CTR AT OAKLAND · PI KRAUSS, RONALD M · 2010 to 2014
$12.8M
Characterizing Genetic Susceptibility to Breast and Prostate Cancer; the BPC3U01CA098233 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI HUNTER, DAVID JOHN · 2003 to 2010
$10.8M
TRIAL OF VITAMIN E, BETA-CAROTENE &ASPRIN IN WOMENR01HL043851 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI BURING, JULIE E · 1991 to 2000
$1.6M
PROSPECTIVE STUDY OF DIET AND CANCER IN WOMENR01CA040356 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI SPEIZER, FRANK E · 1985 to 2000
$824k
PROSPECTIVE STUDY OF DIET AND CANCER IN WOMENR37CA040356 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI SPEIZER, FRANK E · 1987 to 1994
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NCI NIH HHS CA 047988NCI NIH HHS CA 40356NCI NIH HHS R01 CA040356NCI NIH HHS R01 CA047988NCI NIH HHS U01 CA098233NCI NIH HHS U01-CA98233NHLBI NIH HHS HL 043851NHLBI NIH HHS HL69757NHLBI NIH HHS R01 HL043851NHLBI NIH HHS U01 HL069757NHLBI NIH HHS U19 HL069757
6 · The paper itself

Abstract

Age at menarche and age at natural menopause are associated with causes of substantial morbidity and mortality such as breast cancer and cardiovascular disease. We conducted a joint analysis of two genome-wide association studies of these two traits in a total of 17,438 women from the Nurses' Health Study (NHS, N = 2,287) and the Women's Genome Health Study (WGHS, N = 15,151). For age at menarche, we identified ten associated SNPs (P = 1 × 10(-7)-3 × 10(-13)) clustered at 6q21 (in or near the gene LIN28B) and 9q31.2 (in an intergenic region). For age at natural menopause, we identified 13 associated SNPs (P = 1 × 10(-7)-1 × 10(-21)) clustered at 20p12.3 (in the gene MCM8), 19q13.42 (in or near the gene BRSK1), 5q35.2 (in or near genes UIMC1 and HK3) and 6p24.2 (in the gene SYCP2L). These newly identified loci might expand understanding of the biological pathways regulating these two traits.

Indexed as

Polymorphism, Single NucleotideAge FactorsChromosome MappingChromosomes, Human, Pair 19Chromosomes, Human, Pair 20Chromosomes, Human, Pair 5Chromosomes, Human, Pair 6Chromosomes, Human, Pair 9Cohort StudiesFemaleGenome-Wide Association StudyHumansMenarcheMenopause

Identifiers

PMID19448621
PMCPMC2888798

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.