Evidence map›Paper›PMID 19446736›Full record

ArticleMethods in enzymology2009

Measuring the proximity of T-lymphocyte CXCR4 and TCR by fluorescence resonance energy transfer (FRET).

Ashok Kumar, Kimberly N Kremer, Olivia L Sims, Karen E Hedin

Open access · greenAbstract read
In one paragraph

Article in Methods in enzymology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. CXCR4 signaling and function require the expression of the IgD-class B-cell antigen receptor.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Ashok KumarEndocrine Research Unit, Mayo Clinic, Rochester, Minnesota, USA.
Kimberly N Kremer
Olivia L Sims
Karen E Hedin
Mayo Clinic · USMayo Clinic in Florida · US

Funding

CXCR4 CHEMOKINE RECEPTOR REGULATION OF ERK MAP KINASER01GM059763 · NIGMS · MAYO CLINIC ROCHESTER · PI HEDIN, KAREN E. · 1999 to 2015
$4.1M
NIGMS NIH HHS R01 GM059763
6 · The paper itself

Abstract

Multiprotein complexes play an important role in nearly all cell functions; therefore, the characterization of protein-protein interactions in living cells constitutes an important step in the analysis of cellular signaling pathways. Using fluorescence resonance energy transfer (FRET) as a "molecular ruler" is a powerful approach for identifying biologically relevant molecular interactions with high spatiotemporal resolution. Here, we describe two methods that use FRET to detect a physical interaction between the T-cell antigen receptor (TCR) and the CXCR4 chemokine receptor in living T lymphocytes. These FRET approaches use two different sets of chromophores. We discuss the design strategies, control experiments, and pitfalls involved in using these FRET approaches. Although there is no perfect pair of chromophores for FRET, the two FRET methods described here provide complementary and reliable insight into the molecular interactions between these receptor molecules.

Indexed as

Flow CytometryFluorescence Resonance Energy TransferHumansReceptors, Antigen, T-CellReceptors, CXCR4T-LymphocytesCXCR4 protein, humanReceptors, Antigen, T-CellReceptors, CXCR4

Identifiers

PMID19446736
PMCPMC2919056
OpenAlexW1533093045

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.