Evidence map›Paper›PMID 19439603›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2009

Alternatively spliced isoforms of TRIP8b differentially control h channel trafficking and function.

Alan S Lewis, Emily Schwartz, C Savio Chan, Yoav Noam, Minyoung Shin, Wytse J Wadman, D James Surmeier, Tallie Z Baram, Robert L Macdonald, Dane M Chetkovich

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 102 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
102citing papers in PubMed, 1 pooled it
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

102 citing papers in PubMed, 1 synthesis or guideline pooled it, 153 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. IProgress in biophysics and molecular biology · 2021
    Review
  20. Article

42 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Alan S LewisThe Ken & Ruth Davee Department of Neurology and Clinical Neurosciences, Northwestern University, Chicago, Illinois 60611, USA.
Emily Schwartz
C Savio Chan
Yoav Noam
Minyoung Shin
Wytse J Wadman
D James Surmeier
Tallie Z Baram
Robert L Macdonald
Dane M Chetkovich
Northwestern University · USUniversity of California, Irvine · USNetherlands Institute for Neuroscience · NLSalk Institute for Biological Studies · USVanderbilt University · US

Funding

SYNAPTIC CONTROLOF PALLIDAL ACTIVITYP50NS047085 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI KRAINC, DIMITRI · 2003 to 2018
$19.2M
RECOMBINANT/NATIVE GABAA RECEPTORSR01NS033300 · NINDS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MACDONALD, ROBERT LOUDEN · 1995 to 2016
$5.0M
HCN Channel Trafficking in EpilepsyR01NS059934 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI CHETKOVICH, DANE M · 2008 to 2017
$3.1M
Pathophysiology and treatment of GABRG2 nonsense epilepsy mutationsR01NS051590 · NINDS · VANDERBILT UNIVERSITY · PI MACDONALD, ROBERT LOUDEN · 2007 to 2014
$2.7M
Febrile Seizure Model - Neuronal Injury and MechanismsR37NS035439 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI BARAM, TALLIE Z. · 2006 to 2012
$2.6M
Mechanisms of Glutamate Receptor Synaptic ClusteringK02NS055995 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI CHETKOVICH, DANE M · 2006 to 2010
$867k
The Role of TRIP8b in Neuronal HCN Channel TraffickingF30NS064757 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LEWIS, ALAN SETH · 2009 to 2012
$125k
NINDS NIH HHS 1F30NS064757NINDS NIH HHS 1K02NS05595NINDS NIH HHS 1R01NS059934NINDS NIH HHS F30 NS064757NINDS NIH HHS K02 NS055995NINDS NIH HHS NS047085NINDS NIH HHS P50 NS047085NINDS NIH HHS R01 NS033300NINDS NIH HHS R01 NS051590NINDS NIH HHS R01 NS059934NINDS NIH HHS R37 NS035439NINDS NIH HHS R37NS35439
6 · The paper itself

Abstract

Hyperpolarization-activated cyclic nucleotide-gated (HCN) channels (h channels) are the molecular basis for the current, I(h), which contributes crucially to intrinsic neuronal excitability. The subcellular localization and biophysical properties of h channels govern their function, but the mechanisms controlling these characteristics, and especially the potential role of auxiliary subunits or other binding proteins, remain unclear. We focused on TRIP8b, an h channel-interacting protein that colocalizes with HCN1 in cortical and hippocampal pyramidal neuron dendrites, and found that it exists in multiple alternative splice variants with distinct effects on h channel trafficking and function. The developmentally regulated splice variants of TRIP8b all shared dual, C terminus-located interaction sites with HCN1. When coexpressed with HCN1 in heterologous cells individual TRIP8b isoforms similarly modulated gating of I(h), causing a hyperpolarizing shift in voltage dependence of channel activation, but differentially upregulated or downregulated I(h) current density and HCN1 surface expression. In hippocampal neurons, coexpression of TRIP8b isoforms with HCN1 produced isoform-specific changes of HCN1 localization. Interestingly, the TRIP8b isoforms most abundant in the brain are those predicted to enhance h channel surface expression. Indeed, shRNA knockdown of TRIP8b in hippocampal neurons significantly reduced native I(h). Thus, although TRIP8b exists in multiple splice isoforms, our data suggest that the predominant role of this protein in brain is to promote h channel surface expression and enhance I(h). Because I(h) expression is altered in models of several diseases, including temporal lobe epilepsy, TRIP8b may play a role in both normal neuronal function and in aberrant neuronal excitability associated with neurological disease.

Indexed as

Alternative SplicingAnimalsBase SequenceBrainCell LineCells, CulturedCyclic Nucleotide-Gated Cation ChannelsGene Knockdown TechniquesHippocampusHumansHyperpolarization-Activated Cyclic Nucleotide-Gated ChannelsMembrane PotentialsMembrane ProteinsMolecular Sequence DataNeuronsPotassium ChannelsCyclic Nucleotide-Gated Cation ChannelsHCN1 protein, humanHcn1 protein, ratHyperpolarization-Activated Cyclic Nucleotide-Gated ChannelsMembrane ProteinsPex5l protein, ratPotassium ChannelsProtein Isoforms

Identifiers

PMID19439603
PMCPMC2730639
OpenAlexW2034633663

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.