Evidence map›Paper›PMID 19438716›Full record

ArticleThe FEBS journal2009

Characterization of the NAD(P)H oxidase and metronidazole reductase activities of the RdxA nitroreductase of Helicobacter pylori.

Igor N Olekhnovich, Avery Goodwin, Paul S Hoffman

Open access · greenAbstract read
In one paragraph

Article in The FEBS journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. RdxA-independent mechanism ofFrontiers in microbiology · 2025
    Article
  5. Loureirin A is a narrow-spectrum antimicrobial agent againstAntimicrobial agents and chemotherapy · 2024
    Article
  6. Functional determination of site-mutations inFrontiers in cell and developmental biology · 2024
    Article
  7. Levofloxacin+Tetracycline Quadruple Regimen for Eradication ofMiddle East journal of digestive diseases · 2023
    Article
  8. Review
  9. Article
  10. Genetically Encoded Activators of Small Molecules for Imaging and Drug Delivery.Angewandte Chemie (International ed. in English) · 2020
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Igor N OlekhnovichDepartment of Medicine, University of Virginia School of Medicine, Charlottesville, VA 22908, USA.
Avery Goodwin
Paul S Hoffman
University of Virginia · USCenter for Drug Evaluation and Research · US

Funding

UVA Digestive Health Research CenterP30DK067629 · NIDDK · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI COHN, STEVEN M · 2004 to 2008
$5.6M
Nitrothiazolides:Broad-Spectrum Category B Anti-parasitic/bacterial TherapeuticsU01AI075520 · NIAID · UNIVERSITY OF VIRGINIA · PI HOFFMAN, PAUL STOKES · 2007 to 2011
$2.6M
Helicobacter pylori: Tactic Responses and Persistence in the Gastric MucosaR01DK073823 · NIDDK · UNIVERSITY OF VIRGINIA · PI HOFFMAN, PAUL STOKES · 2007 to 2011
$1.5M
NIAID NIH HHS 5U01AI075520NIAID NIH HHS U01 AI075520NIDDK NIH HHS 5R01DK073823NIDDK NIH HHS P30 DK067629NIDDK NIH HHS R01 DK073823
6 · The paper itself

Abstract

Metronidazole (MTZ) is widely used in combination therapies against the human gastric pathogen Helicobacter pylori. Resistance to this drug is common among clinical isolates and results from loss-of-function mutations in rdxA, which encodes an oxygen-insensitive nitroreductase. The RdxA-associated MTZ-reductase activity of H. pylori is lost upon cell disruption. Here we provide a mechanistic explanation for this phenomenon. Under aerobic conditions, His6-tagged RdxA protein (purified from Escherichia coli), catalyzed NAD(P)H-dependent reductions of nitroaromatic and quinone substrates including nitrofurazone, nitrofurantoin, furazolidone, CB1954 and 1,4-benzoquinone, but not MTZ. Unlike other nitroreductases, His6-RdxA exhibited potent NAD(P)H-oxidase activity (k(cat) = 2.8 s(-1)) which suggested two possible explanations for the role of oxygen in MTZ reduction: (a) NAD(P)H-oxidase activity promotes cellular hypoxia (nonspecific reduction of MTZ), and (b) molecular oxygen out-competes MTZ for reducing equivalents. The first hypothesis was eliminated upon finding that rdxA expression, although increasing MTZ toxicity in both E. coli and H. pylori constructs, did not increase paraquat toxicity, even though both are of similar redox potential. The second hypothesis was confirmed by demonstrating NAD(P)H-dependent MTZ-reductase activity (apparent K(m) = 122 +/- 58 microM, k(cat) = 0.24 s(-1)) under strictly anaerobic conditions. The MTZ-reductase activity of RdxA was 60 times greater than for NfsB (E. coli NTR), but 10 times lower than the NADPH-oxidase activity. Whether molecular oxygen directly competes with MTZ or alters the redox state of the FMN cofactors is discussed.

Indexed as

AnaerobiosisAnti-Infective AgentsBacterial ProteinsHelicobacter pyloriKineticsMetronidazoleMolecular StructureNADPH OxidasesNitroreductasesOxidation-ReductionOxygenRecombinant ProteinsSpectrophotometrySubstrate SpecificityAnti-Infective AgentsBacterial ProteinsMetronidazoleNADPH OxidasesNitroreductasesOxygenRdxA protein, Helicobacter pyloriRecombinant Proteins

Identifiers

PMID19438716
PMCPMC2751797
OpenAlexW2060399464

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.