Evidence map›Paper›PMID 19435719›Full record

SynthesisAnnals of the rheumatic diseases2010

Association of CD40 with rheumatoid arthritis confirmed in a large UK case-control study.

Gisela Orozco, Steve Eyre, Anne Hinks, Xiayi Ke, Wellcome Trust Case Control consortium YEAR Consortium, Anthony G Wilson, Deborah E Bax, Ann W Morgan, Paul Emery, Sophia Steer and 7 more

Erratum issuedOpen access · bronzeAbstract readMeta-AnalysisMulticenter Study
In one paragraph

Synthesis in Annals of the rheumatic diseases, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 34 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed, 2 pooled it
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 2 syntheses or guidelines pooled it, 80 citations in OpenAlex.

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  20. Polymorphism of the IL-18 and CD40 genes and Liver Transplant Outcome in Iranian Patients.International journal of organ transplantation medicine · 2014
    Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

17 authors at 9 institutions in 1 country.

Gisela OrozcoEpidemiology Unit, Faculty of Medical and Human Sciences, University of Manchester, Stopford Building, Oxford Road, Manchester M13 9PT, UK. gisela.orozco@manchester.ac.uk
Steve Eyre
Anne Hinks
Xiayi Ke
Wellcome Trust Case Control consortium YEAR Consortium
Anthony G Wilson
Deborah E Bax
Ann W Morgan
Paul Emery
Sophia Steer
Lynne Hocking
David M Reid
Paul Wordsworth
Pille Harrison
Wendy Thomson
Anne Barton
Jane Worthington
University of Manchester · GBMRC Epidemiology Unit · GBUniversity of Aberdeen · GBUniversity of Sheffield · GBKing's College Hospital NHS Foundation Trust · GBNIHR Leeds Musculoskeletal Biomedical Research Unit · GBNIHR Oxford Musculoskeletal Biomedical Research Centre · GBUniversity of Leeds · GBUniversity of Oxford · GB

Funding

Arthritis Research UK 17552Medical Research Council G0000934Versus Arthritis 18475Wellcome TrustWellcome Trust 068545/Z/02
6 · The paper itself

Abstract

objectiveA recent meta-analysis of published genome-wide association studies (GWAS) in populations of European descent reported novel associations of markers mapping to the CD40, CCL21 and CDK6 genes with rheumatoid arthritis (RA) susceptibility while a large-scale, case-control association study in a Japanese population identified association with multiple single nucleotide polymorphisms (SNPs) in the CD244 gene. The aim of the current study was to validate these potential RA susceptibility markers in a UK population.

methodsA total of 4 SNPs (rs4810485 in CD40, rs2812378 in CCL21, rs42041 in CDK6 and rs6682654 in CD244) were genotyped in a UK cohort comprising 3962 UK patients with RA and 3531 healthy controls using the Sequenom iPlex platform. Genotype counts in patients and controls were analysed with the chi(2) test using Stata.

resultsAssociation to the CD40 gene was robustly replicated (p=2 x 10(-4), OR 0.86, 95% CI 0.79 to 0.93) and modest evidence was found for association with the CCL21 locus (p=0.04, OR 1.08, 95% CI 1.01 to 1.16). However, there was no evidence for association of rs42041 (CDK6) and rs6682654 (CD244) with RA susceptibility in this UK population. Following a meta-analysis including the original data, association to CD40 was confirmed (p=7.8 x 10(-8), OR 0.87 (95% CI 0.83 to 0.92).

conclusionIn this large UK cohort, strong association of the CD40 gene with susceptibility to RA was found, and weaker evidence for association with RA in the CCL21 locus.

Indexed as

Arthritis, RheumatoidCase-Control StudiesCD40 AntigensChemokine CCL21Cyclin-Dependent Kinase 6FemaleGene FrequencyGenetic MarkersGenetic Predisposition to DiseaseGenotypeHumansMalePolymorphism, Single NucleotideCCL21 protein, humanCD40 AntigensCDK6 protein, humanChemokine CCL21Cyclin-Dependent Kinase 6Genetic Markers

Identifiers

PMID19435719
PMCPMC3009392
OpenAlexW2150862288

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.