Evidence map›Paper›PMID 19432808›Full record

ArticleMolecular microbiology2009

TP0262 is a modulator of promoter activity of tpr Subfamily II genes of Treponema pallidum ssp. pallidum.

Lorenzo Giacani, Charmie Godornes, Maritza Puray-Chavez, Cristina Guerra-Giraldez, Martin Tompa, Sheila A Lukehart, Arturo Centurion-Lara

Abstract read
In one paragraph

Article in Molecular microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. In-Depth Proteome Coverage of In Vitro-CulturedJournal of proteome research · 2024
    Article
  2. Article
  3. Review
  4. Article
  5. Syphilis.Nature reviews. Disease primers · 2017
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Genetic diversity in Treponema pallidum: implications for pathogenesis, evolution and molecular diagnostics of syphilis and yaws.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2012
    Review
  12. Article
  13. The Treponema pallidum Outer Membrane.Current topics in microbiology and immunology
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Lorenzo GiacaniDepartment of Medicine, University of Washington, Seattle, WA 98104, USA.
Charmie Godornes
Maritza Puray-Chavez
Cristina Guerra-Giraldez
Martin Tompa
Sheila A Lukehart
Arturo Centurion-Lara

Funding

TREPONEMA PALLIDUM PATHOGENESIS ASSOCIATED MOLECULESR01AI042143 · NIAID · UNIVERSITY OF WASHINGTON · PI LUKEHART, SHEILA A. · 1998 to 2015
$5.4M
Project 4: Antigenic variation of TprKR01AI063940 · NIAID · UNIVERSITY OF WASHINGTON · PI LUKEHART, SHEILA A. · 2004 to 2013
$3.3M
New Methods for High-Resolution Comparative ModelingP20GM076222 · NIGMS · RESEARCH INST OF FOX CHASE CAN CTR · PI DUNBRACK, ROLAND L · 2006 to 2009
$3.3M
NIAID NIH HHS AI42143NIAID NIH HHS AI63940NIAID NIH HHS R01 AI042143NIAID NIH HHS R01 AI063940NIGMS NIH HHS GM076222NIGMS NIH HHS P20 GM076222
6 · The paper itself

Abstract

Transcriptional regulation in Treponema pallidum ssp. pallidum is poorly understood, primarily because this organism cannot be cultivated in vitro or genetically manipulated. We have recently shown a phase variation mechanism controlling transcription initiation of Subfamily II tpr (T. pallidumrepeat) genes (tprE, tprG and tprJ), a group of virulence factor candidates. Furthermore, the same study suggested that additional mechanisms might influence the level of transcription of these tprs. The T. pallidum genome sequence has revealed a few open reading frames with similarity to known bacterial transcription factors, including four catabolite activator protein homologues. In this work, sequences matching the Escherichia coli cAMP receptor protein (CRP) binding motif were identified in silico upstream of tprE, tprG and tprJ. Using elecrophoretic mobility shift assay and DNaseI footprinting assay, recombinant TP0262, a T. pallidum CRP homologue, was shown to bind specifically to amplicons obtained from the tpr promoters containing putative CRP binding motifs. Using a heterologous reporter system, binding of TP0262 to these promoters was shown to either increase (tprE and tprJ) or decrease (tprG) tpr promoter activity. This is the first characterization of a T. pallidum transcriptional modulator that influences tpr promoter activity.

Indexed as

Promoter Regions, GeneticBacterial ProteinsBase SequenceCloning, MolecularCyclic AMP Receptor ProteinDNA, BacterialDNA FootprintingElectrophoretic Mobility Shift AssayEscherichia coliGene Expression Regulation, BacterialMolecular Sequence DataRecombinant ProteinsTranscription, GeneticTreponema pallidumBacterial ProteinsCyclic AMP Receptor ProteinDNA, BacterialRecombinant Proteins

Identifiers

PMID19432808
PMCPMC2698047

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.