Evidence map›Paper›PMID 19432807›Full record

ArticleMolecular microbiology2009

Fluoresceination of FepA during colicin B killing: effects of temperature, toxin and TonB.

Chuck R Smallwood, Amparo Gala Marco, Qiaobin Xiao, Vy Trinh, Salete M C Newton, Phillip E Klebba

Open access · bronzeAbstract read
In one paragraph

Article in Molecular microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.3field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Siderophore-mediated iron acquisition byJournal of bacteriology · 2024
    Article
  3. Article
  4. Article
  5. Conformational rearrangements in the N-domain ofThe Journal of biological chemistry · 2020
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Energy-dependent motion of TonB in the Gram-negative bacterial inner membrane.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  12. Article
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Chuck R SmallwoodThe Department of Chemistry and Biochemistry, University of Oklahoma, Norman, OK 73019, USA.
Amparo Gala Marco
Qiaobin Xiao
Vy Trinh
Salete M C Newton
Phillip E Klebba
University of Oklahoma · US

Funding

LOOP DELETION MUTAGENESIS OF FEPAR01GM053836 · NIGMS · UNIVERSITY OF OKLAHOMA NORMAN · PI KLEBBA, PHILLIP E · 1995 to 2009
$2.4M
NIGMS NIH HHS GM53836NIGMS NIH HHS R01 GM053836
6 · The paper itself

Abstract

We studied the reactivity of 35 genetically engineered Cys sulphydryl groups at different locations in Escherichia coli FepA. Modification of surface loop residues by fluorescein maleimide (FM) was strongly temperature-dependent in vivo, whereas reactivity at other sites was much less affected. Control reactions with bovine serum albumin showed that the temperature dependence of loop residue reactivity was unusually high, indicating that conformational changes in multiple loops (L2, L3, L4, L5, L7, L8, L10) transform the receptor to a more accessible form at 37 degrees C. At 0 degrees C colicin B binding impaired or blocked labelling at 8 of 10 surface loop sites, presumably by steric hindrance. Overall, colicin B adsorption decreased the reactivity of more than half of the 35 sites, in both the N- and C- domains of FepA. However, colicin B penetration into the cell at 37 degrees C did not augment the chemical modification of any residues in FepA. The FM modification patterns were similarly unaffected by the tonB locus. FepA was expressed at lower levels in a tonB host strain, but when we accounted for this decrease its FM labelling was comparable whether TonB was present or absent. Thus we did not detect TonB-dependent structural changes in FepA, either alone or when it interacted with colicin B at 37 degrees C. The only changes in chemical modification were reductions from steric hindrance when the bacteriocin bound to the receptor protein. The absence of increases in the reactivity of N-domain residues argues against the idea that the colicin B polypeptide traverses the FepA channel.

Indexed as

Bacterial Outer Membrane ProteinsCarrier ProteinsColicinsEscherichia coliEscherichia coli ProteinsFluoresceinsFluorescenceMembrane ProteinsMutagenesis, Site-DirectedProtein BindingProtein TransportReceptors, Cell SurfaceTemperatureBacterial Outer Membrane ProteinsCarrier ProteinsColicinsenterobactin receptorEscherichia coli Proteinsfluorescein 5-maleimideFluoresceinsMembrane ProteinsReceptors, Cell SurfacetonB protein, E coli

Identifiers

PMID19432807
PMCPMC3082853
OpenAlexW2136538003

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.