Evidence map›Paper›PMID 19430959›Full record

ArticleMolecular biology reports2010

SATB1 binds an intronic MAR sequence in human PI3kgamma in vitro.

Rong Cai, Weirong Xu, Bingbing Dai, Xia Cai, Rongting Xu, Jian Lu

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular biology reports, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Rong CaiDepartment of Biochemistry and Molecular Biology, Institute of Medical Sciences, Shanghai Jiao Tong University School of Medicine, Shanghai, People's Republic of China.
Weirong Xu
Bingbing Dai
Xia Cai
Rongting Xu
Jian Lu
Shanghai Jiao Tong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In our previous study, an intronic MAR sequence in human PI3Kgamma gene (PIMAR) was identified using bioinformatics and biochemical methods. We used MatInspector software to identify potential binding sites for MAR-binding proteins in PIMAR. In this study, a tissue-specific MAR-binding protein (SATB1) was used to characterize the potential binding sites. Southwestern blot analysis indicates that recombinant SATB1 directly binds PIMAR sequence in vitro. Reporter gene assay showed that overexpression of SATB1 downregulates the luciferase reporter linked with reversed PIMAR by approximately threefold in the NIH-3T3 cell line. These results indicate that SATB1 may play antagonistic roles in PI3Kgamma transcriptional regulation.

Indexed as

AnimalsBinding SitesBlotting, SouthwesternClass Ib Phosphatidylinositol 3-KinaseGene Expression RegulationHumansIntronsIn Vitro TechniquesIsoenzymesLuciferasesMatrix Attachment Region Binding ProteinsMatrix Attachment RegionsMiceNIH 3T3 CellsPhosphatidylinositol 3-KinasesPlasmidsClass Ib Phosphatidylinositol 3-KinaseIsoenzymesLuciferasesMatrix Attachment Region Binding ProteinsPhosphatidylinositol 3-KinasesPIK3CG protein, humanPik3cg protein, mouseSATB1 protein, human

Identifiers

PMID19430959
OpenAlexW2034204188

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.