ReviewMethods (San Diego, Calif.)2009
Single molecule transcription elongation.
Review in Methods (San Diego, Calif.), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
21 citing papers in PubMed.
- Chromatin fiber breaks into clutches under tension and crowding.Nucleic acids research · 2022Article
- Single-Molecule Techniques to Study Chromatin.Frontiers in cell and developmental biology · 2021Review
- DNA replication:Computational and structural biotechnology journal · 2021Review
- A review on nonlinear DNA physics.Royal Society open science · 2020Review
- Bayesian inference and comparison of stochastic transcription elongation models.PLoS computational biology · 2020Article
- Article
- The mechanism of DNA unwinding by the eukaryotic replicative helicase.Nature communications · 2019Article
- Single-molecule FRET method to investigate the dynamics of transcription elongation through the nucleosome by RNA polymerase II.Methods (San Diego, Calif.) · 2019Article
- Observing Single RNA Polymerase Molecules Down to Base-Pair Resolution.Methods in molecular biology (Clifton, N.J.) · 2017Article
- Nucleosomal arrangement affects single-molecule transcription dynamics.Proceedings of the National Academy of Sciences of the United States of America · 2016Article
- Mechanisms of backtrack recovery by RNA polymerases I and II.Proceedings of the National Academy of Sciences of the United States of America · 2016Article
- Backtracking behavior in viral RNA-dependent RNA polymerase provides the basis for a second initiation site.Nucleic acids research · 2015Article
- High Spatiotemporal-Resolution Magnetic Tweezers: Calibration and Applications for DNA Dynamics.Biophysical journal · 2015Article
- Conserved Cis-Regulatory Modules Control Robustness in Msx1 Expression at Single-Cell Resolution.Genome biology and evolution · 2015Article
- High-throughput single-molecule studies of protein-DNA interactions.FEBS letters · 2014Review
- Morse potential in DNA molecule - an experiment proposal.Journal of biosciences · 2012Article
- Single-molecule studies of transcription: from one RNA polymerase at a time to the gene expression profile of a cell.Journal of molecular biology · 2011Article
- Review
- Single-molecule studies of RNA polymerase: one singular sensation, every little step it takes.Molecular cell · 2011Review
- Enhancement of single-molecule fluorescence signals by colloidal silver nanoparticles in studies of protein translation.ACS nano · 2011Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
3 authors.
Funding
Abstract
Single molecule optical trapping assays have now been applied to a great number of macromolecular systems including DNA, RNA, cargo motors, restriction enzymes, DNA helicases, chromosome remodelers, DNA polymerases and both viral and bacterial RNA polymerases. The advantages of the technique are the ability to observe dynamic, unsynchronized molecular processes, to determine the distributions of experimental quantities and to apply force to the system while monitoring the response over time. Here, we describe the application of these powerful techniques to study the dynamics of transcription elongation by RNA polymerase II from Saccharomyces cerevisiae.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.