Evidence map›Paper›PMID 19426738›Full record

ArticleJournal of molecular biology2009

The box H/ACA snoRNP assembly factor Shq1p is a chaperone protein homologous to Hsp90 cochaperones that binds to the Cbf5p enzyme.

Katherine S Godin, Hélène Walbott, Nicolas Leulliot, Herman van Tilbeurgh, Gabriele Varani

Open access · greenAbstract read
In one paragraph

Article in Journal of molecular biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 22 citations in OpenAlex.

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  11. Biology and applications of small nucleolar RNAs.Cellular and molecular life sciences : CMLS · 2011
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Katherine S GodinDepartment of Chemistry, University of Washington, Seattle, 98195, USA.
Hélène Walbott
Nicolas Leulliot
Herman van Tilbeurgh
Gabriele Varani
Université Paris-Sud · FRUniversity of Washington · USUniversité Paris Cité · FR

Funding

Specificity of mRNA 3'-end processing and transcription terminationR01GM064440 · NIGMS · UNIVERSITY OF WASHINGTON · PI VARANI, GABRIELE · 2002 to 2015
$4.5M
Structure of ribonucleoprotein: telomeraseR01CA094926 · NCI · UNIVERSITY OF WASHINGTON · PI VARANI, GABRIELE · 2004 to 2007
$1.2M
NCI NIH HHS R01 CA094926NIGMS NIH HHS R01 GM064440
6 · The paper itself

Abstract

Box H/ACA small nucleolar (sno) ribonucleoproteins (RNPs) are responsible for the formation of pseudouridine in a variety of RNAs and are essential for ribosome biogenesis, modification of spliceosomal RNAs, and telomerase stability. A mature snoRNP has been reconstituted in vitro and is composed of a single RNA and four proteins. However, snoRNP biogenesis in vivo requires multiple factors to coordinate a complex and poorly understood assembly and maturation process. Among the factors required for snoRNP biogenesis in yeast is Shq1p, an essential protein necessary for stable expression of box H/ACA snoRNAs. We have found that Shq1p consists of two independent domains that contain casein kinase 1 phosphorylation sites. We also demonstrate that Shq1p binds the pseudourydilating enzyme Cbf5p through the C-terminal domain, in synergy with the N-terminal domain. The NMR solution structure of the N-terminal domain has striking homology to the 'Chord and Sgt1' domain of known Hsp90 cochaperones, yet Shq1p does not interact with the yeast Hsp90 homologue in vitro. Surprisingly, Shq1p has stand-alone chaperone activity in vitro. This activity is harbored by the C-terminal domain, but it is increased by the presence of the N-terminal domain. These results provide the first evidence of a specific biochemical activity for Shq1p and a direct link to the H/ACA snoRNP.

Indexed as

Amino Acid SequenceHydro-LyasesMagnetic Resonance SpectroscopyMicrotubule-Associated ProteinsModels, MolecularMolecular ChaperonesMolecular Sequence DataNuclear ProteinsProtein BindingProtein Interaction Domains and MotifsProtein Interaction MappingProtein Structure, TertiaryRibonucleoproteins, Small NuclearSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSequence AlignmentCBF5 protein, S cerevisiaeHydro-LyasesMicrotubule-Associated ProteinsMolecular ChaperonesNuclear ProteinsRibonucleoproteins, Small NuclearSaccharomyces cerevisiae ProteinsShq1 protein, S cerevisiae

Identifiers

PMID19426738
PMCPMC2744417
OpenAlexW2094672622

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.