Evidence map›Paper›PMID 19419319›Full record

ArticleJournal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research2009

Oxygen tension regulates the expression of ANK (progressive ankylosis) in an HIF-1-dependent manner in growth plate chondrocytes.

Raihana Zaka, Arnold S Dion, Anna Kusnierz, Jolene Bohensky, Vickram Srinivas, Theresa Freeman, Charlene J Williams

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Raihana ZakaDepartment of Medicine, Thomas Jefferson University, Philadelphia, Pennsylvania, USA.
Arnold S Dion
Anna Kusnierz
Jolene Bohensky
Vickram Srinivas
Theresa Freeman
Charlene J Williams
Thomas Jefferson University · US

Funding

The role of ANK in the regulation of PPi elaborationR01AR052619 · NIAMS · THOMAS JEFFERSON UNIVERSITY · PI WILLIAMS, CHARLENE J · 2005 to 2008
$1.1M
NIAMS NIH HHS R01 AR052619
6 · The paper itself

Abstract

The proximal promoter region of ANK, a gene that codes for a protein that regulates the transport of inorganic pyrophosphate, contains two hypoxia responsive elements (HREs); therefore, we studied the expression and function of ANK at different oxygen tensions. ATDC5 and N1511 clonal chondrocytic cells were cultured in either hypoxia (2% O(2)) or normoxia (21% O(2)). Transcript and protein levels of ANK were depressed in hypoxic conditions, as were levels of extracellular pyrophosphate (ePPi). To determine whether HIF-1 was involved in the oxemic response, Hif-1alpha knockdown cells were exposed to varying oxygen conditions and ANK expression was assessed. Knockdown of Hif-1alpha resulted in low levels of expression of ANK in hypoxia and normoxia. Chromatin immunoprecipitation (ChIP) assays explored the binding of Hif-1alpha to ANK HREs and showed that Hif-1alpha is able to bind to the HREs of ANK more avidly in normoxia than in hypoxia. Furthermore, functional studies of Hif-1alpha activity using luciferase reporter assays of wildtype and mutagenized HREs showed that only HRE-1 binds Hif-1alpha in normoxia. Expression of ANK in growth plate and articular cartilage was low in hypoxic regions of the tissues, and higher levels of ANK expression were observed in the synovium and meniscus in regions that have a normally higher oxygen tension. The data suggest that ANK expression and function in vitro and in vivo are repressed in hypoxic environments and that the effect is regulated by HIF-1.

Indexed as

AnimalsBase SequenceBinding SitesCell HypoxiaChondrocytesChromatin ImmunoprecipitationConsensus SequenceGene Expression RegulationGene Knockdown TechniquesGrowth PlateHumansHypoxia-Inducible Factor 1, alpha SubunitImmunohistochemistryMembrane ProteinsMiceModels, BiologicalANKH protein, humanank protein, mouseHypoxia-Inducible Factor 1, alpha SubunitMembrane ProteinsOxygenPhosphate Transport ProteinsVascular Endothelial Growth Factor A

Identifiers

PMID19419319
PMCPMC2765931
OpenAlexW2057762524

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.