Evidence map›Paper›PMID 19415324›Full record

ArticlePlanta2009

Amino acid metabolism at the maternal-filial boundary of young barley seeds: a microdissection-based study.

Johannes Thiel, Martin Müller, Winfriede Weschke, Hans Weber

Abstract read
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In one paragraph

Article in Planta, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
6.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 36 citations in OpenAlex.

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  12. Development of endosperm transfer cells in barley.Frontiers in plant science · 2014
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Johannes ThielLeibniz-Institut Für Pflanzengenetik und Kulturpflanzenforschung (IPK), Corrensstrasse 3, 06466 Gatersleben, Germany. thielj@ipk-gatersleben.de
Martin Müller
Winfriede Weschke
Hans Weber
Leibniz Institute of Plant Genetics and Crop Plant Research · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The nucellar projection (NP)/endosperm transfer cell (ETC) complex represents the link between maternal and filial seed tissues in barley and mediates nutrient transfer into the endosperm. Cells of NP function as metabolic interface to precondition amino acid supply of the endosperm. The organ displays a top-down gradient of differentiation, with mitotically active, differentiating/elongating as well as disintegrating cells, characterized by proteolysis and nitrogen remobilization. To understand metabolism, interconversion and transfer of amino acids at the maternal-filial boundary, we applied a combined transcriptome and metabolite approach based on laser-assisted microdissection. Results suggest that amino acid degradation observed in NP largely occurs within mitochondria, consistent with their role in controlling amino acid homeostasis and metabolism. Differentially expressed genes and free amino acid levels associated with glutamate and glutamine metabolism indicate concerted action of glutamine dehydrogenase, glutamine synthetase and alanine:glyoxylate aminotransferase 2 within a hypothetical cycle for glutamine and alanine degradation and re-synthesis of the preferred transport form glutamine. Stimulation of gene expression involved in methionine metabolism in NP suggests a pathway of regulated synthesis of S-methylmethionine and a possible mechanism for the transfer of reduced sulphur from maternal tissues into the endosperm. Thus, the established micromethods revealed strategies in NP of young barley grains for mobilization and metabolism of transient N and S reserves and transfer into the endosperm.

Indexed as

Amino AcidsGene Expression Regulation, PlantGlutamate-Ammonia LigaseGlutamic AcidGlutamineHomeostasisHordeumMetabolic Networks and PathwaysMetabolomicsMicrodissectionPlant ProteinsSeedsAmino AcidsGlutamate-Ammonia LigaseGlutamic AcidGlutaminePlant Proteins

Identifiers

PMID19415324
OpenAlexW1992930563

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.