Evidence map›Paper›PMID 19414591›Full record

ArticleThe Journal of biological chemistry2009

Intrinsic RNA binding by the eukaryotic initiation factor 4F depends on a minimal RNA length but not on the m7G cap.

Nicholas M Kaye, Kelly J Emmett, William C Merrick, Eckhard Jankowsky

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 43 citations in OpenAlex.

  1. Cryptic intronic transcriptional initiation generates efficient endogenous mRNA templates for C9orf72-associated RAN translation.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Dynamics and Regulation of mRNA Cap Recognition by Human eIF4F.bioRxiv : the preprint server for biology · 2025
    Article
  3. Article
  4. The mechanism of mRNA activation.bioRxiv : the preprint server for biology · 2023
    Article
  5. Article
  6. Article
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  10. Review
  11. Article
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  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. A mechanistic overview of translation initiation in eukaryotes.Nature structural & molecular biology · 2012
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Nicholas M KayeDepartment of Biochemistry, Center for RNA Molecular Biology, School of Medicine, Case Western Reserve University, Cleveland, OH 44106, USA.
Kelly J Emmett
William C Merrick
Eckhard Jankowsky
Case Western Reserve University · US

Funding

Mechansim of DExH/D proteinsR01GM067700 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI JANKOWSKY, ECKHARD · 2003 to 2015
$4.2M
MECHANISM OF PROTEIN SYNTHESIS INTITIATIONR01GM026796 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI MERRICK, WILLIAM C. · 1985 to 2008
$2.6M
NIGMS NIH HHS GM0026796NIGMS NIH HHS GM067700NIGMS NIH HHS R01 GM026796NIGMS NIH HHS R01 GM067700
6 · The paper itself

Abstract

The eukaryotic initiation factor 4F (eIF4F) is thought to be the first factor to bind mRNA during 7-methylguanosine (m7G) cap-dependent translation initiation. The multipartite eIF4F contains the cap-binding protein eIF4E, and it is assumed that eIF4F binds mRNAs primarily at the 5' m7G cap structure. We have analyzed equilibrium binding of rabbit eIF4F to a series of diverse RNAs and found no impact of the 5'-cap on the stability of eIF4F-RNA complexes. However, eIF4F preferentially and cooperatively binds to RNAs with a minimum length of approximately 60 nucleotides in vitro. Furthermore, translation activity in rabbit reticulocyte lysate is strongly inhibited by RNAs exceeding this length, but not by shorter ones, consistent with the notion that eIF4F in its physiological environment preferentially binds longer RNAs, too. Collectively, our results indicate that intrinsic RNA binding by eIF4F depends on a minimal RNA length, rather than on cap recognition. The nonetheless essential m7G cap may either function at steps subsequent to eIF4F-RNA binding, or other factors facilitate preferential binding of eIF4F to the m7G cap.

Indexed as

AnimalsBlotting, WesternEukaryotic Initiation Factor-4FHumansProtein BiosynthesisRabbitsReticulocytesRNA CapsRNA, MessengerEukaryotic Initiation Factor-4FRNA CapsRNA, Messenger

Identifiers

PMID19414591
PMCPMC2719413
OpenAlexW2137063826

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.