ReviewJournal of plant research2009
Functional genomics using RIKEN Arabidopsis thaliana full-length cDNAs.
Review in Journal of plant research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
9 citing papers in PubMed.
- Overexpression of a developing xylem cDNA library in transgenic poplar generates high mutation rate specific to wood formation.Plant biotechnology journal · 2020Article
- High-throughput sequencing and de novo assembly of Brassica oleracea var. Capitata L. for transcriptome analysis.PloS one · 2014Article
- Transcriptome profiling of Gossypium barbadense inoculated with Verticillium dahliae provides a resource for cotton improvement.BMC genomics · 2013Article
- Transcriptome analysis using a high-density oligomicroarray under drought stress in various genotypes of cassava: an important tropical crop.DNA research : an international journal for rapid publication of reports on genes and genomes · 2012Article
- Construction and EST sequencing of full-length, drought stress cDNA libraries for common beans (Phaseolus vulgaris L.).BMC plant biology · 2011Article
- Development of full-length cDNAs from Chinese cabbage (Brassica rapa Subsp. pekinensis) and identification of marker genes for defence response.DNA research : an international journal for rapid publication of reports on genes and genomes · 2011Article
- Molecular screening tools to study Arabidopsis transcription factors.Frontiers in plant science · 2011Article
- Genomics and bioinformatics resources for crop improvement.Plant & cell physiology · 2010Review
- TriFLDB: a database of clustered full-length coding sequences from Triticeae with applications to comparative grass genomics.Plant physiology · 2009Article
Corrections and comments
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Authors and funding
2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Full-length cDNAs are essential for the correct annotation of genomic sequences as well as for the functional analysis of genes and their products. We have isolated about 240,000 RIKEN Arabidopsis full-length (RAFL) cDNA clones. These clones were clustered into about 17,000 non-redundant cDNA groups, i.e., about 60% of all Arabidopsis predicted genes. The sequence information of the RAFL cDNAs is useful for promoter analysis, and for the correct annotation of predicted transcriptional units and gene products. We prepared cDNA microarrays containing independent full-length cDNA groups and studied the expression profiles of genes under various stress- and hormone-treatment conditions, and in various mutants and transgenic plants. These expression profiling studies have shown the expression levels of many genes as a detailed snapshot describing the state of a biological system in planta under various conditions. We have applied RAFL cDNAs to the functional analysis of proteins using the full-length cDNA over-expressing (FOX) gene hunting system and the wheat germ cell-free protein synthesis system. The RAFL cDNA collection was also used for determination of the domain structure of proteins by NMR. In this review, we summarize the present state and perspectives of functional genomics using RAFL cDNAs.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.