Evidence map›Paper›PMID 19412186›Full record

ArticleNature structural & molecular biology2009

Active nuclear import and cytoplasmic retention of activation-induced deaminase.

Anne-Marie Patenaude, Alexandre Orthwein, Yi Hu, Vanina A Campo, Bodil Kavli, Alejandro Buschiazzo, Javier M Di Noia

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In one paragraph

Article in Nature structural & molecular biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 87 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed, 1 pooled it
9.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

87 citing papers in PubMed, 1 synthesis or guideline pooled it, 139 citations in OpenAlex.

  1. Pooled it
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  19. Plasma cells, plasmablasts, and AIDHistochemistry and cell biology · 2020
    Article
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27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 4 countries.

Anne-Marie PatenaudeInstitut de Recherches Cliniques de Montréal, Quebec, Canada.
Alexandre Orthwein
Yi Hu
Vanina A Campo
Bodil Kavli
Alejandro Buschiazzo
Javier M Di Noia
Montreal Clinical Research Institute · CAInstitut Pasteur de Montevideo · UYNorwegian University of Science and Technology · NOUniversité de Montréal · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The enzyme activation-induced deaminase (AID) triggers antibody diversification in B cells by catalyzing deamination and consequently mutation of immunoglobulin genes. To minimize off-target deamination, AID is restrained by several regulatory mechanisms including nuclear exclusion, thought to be mediated exclusively by active nuclear export. Here we identify two other mechanisms involved in controlling AID subcellular localization. AID is unable to passively diffuse into the nucleus, despite its small size, and its nuclear entry requires active import mediated by a conformational nuclear localization signal. We also identify in its C terminus a determinant for AID cytoplasmic retention, which hampers diffusion to the nucleus, competes with nuclear import and is crucial for maintaining the predominantly cytoplasmic localization of AID in steady-state conditions. Blocking nuclear import alters the balance between these processes in favor of cytoplasmic retention, resulting in reduced isotype class switching.

Indexed as

Active Transport, Cell NucleusAICDA (Activation-Induced Cytidine Deaminase)alpha KaryopherinsCell NucleusCytidine DeaminaseDiffusionHeLa CellsHumansModels, MolecularNuclear Localization SignalsProtein BindingProtein ConformationProtein Structure, TertiarySubcellular FractionsAICDA (Activation-Induced Cytidine Deaminase)alpha KaryopherinsCytidine DeaminaseNuclear Localization Signals

Identifiers

PMID19412186
OpenAlexW2038813333

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.