Evidence map›Paper›PMID 19405980›Full record

ArticleAnnals of clinical microbiology and antimicrobials2009

Frequency of vacA, cagA and babA2 virulence markers in Helicobacter pylori strains isolated from Mexican patients with chronic gastritis.

Gloria Luz Paniagua, Eric Monroy, Raymundo Rodríguez, Salvador Arroniz, Cristina Rodríguez, José Luis Cortés, Ausencio Camacho, Erasmo Negrete, Sergio Vaca

Open access · goldAbstract read
In one paragraph

Article in Annals of clinical microbiology and antimicrobials, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 57 citations in OpenAlex.

  1. Trial
  2. Biomolecules · 2026
    Review
  3. Helicobacter pylori Infection in Colombia: Phylogeny, Resistome, and Virulome.APMIS : acta pathologica, microbiologica, et immunologica Scandinavica · 2025
    Article
  4. Cancers · 2024
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  7. Saudi journal of biological sciences · 2018
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  10. Prevalence of SpecificJournal of clinical and diagnostic research : JCDR · 2017
    Article
  11. Low Rate ofJournal of clinical and diagnostic research : JCDR · 2017
    Article
  12. Gut pathogens · 2017
    Article
  13. Article
  14. Article
  15. Gastric cancer research in Mexico: a public health priority.World journal of gastroenterology · 2014
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Gloria Luz PaniaguaUniversidad Nacional Autónoma de Mexico, Los Reyes Iztacala, Tlalnepantla, Estado de Mexico, Mexico. mya@unam.mx
Eric Monroy
Raymundo Rodríguez
Salvador Arroniz
Cristina Rodríguez
José Luis Cortés
Ausencio Camacho
Erasmo Negrete
Sergio Vaca
Universidad Nacional Autónoma de México · MXMexican Social Security Institute · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHelicobacter pylori has been strongly associated with chronic gastritis, peptic and duodenal ulcers, and it is a risk factor for gastric cancer. Three major virulence factors of H. pylori have been described: the vacuolating toxin (VacA), the cytotoxin-associated gene product (CagA) and the adhesion protein BabA2. Since considerable geographic diversity in the prevalence of H. pylori virulence factors has been reported, the aim of this work was to establish the H. pylori and vacA, cagA and babA2 gene status in 238 adult patients, from a marginal urban area of Mexico, with chronic gastritis.

methodsH. pylori was identified in cultures of gastric biopsies by nested PCR. vacA and cagA genes were detected by multiplex PCR, whereas babA2 gene was identified by conventional PCR.

resultsH. pylori-positive biopsies were 143 (60.1%). All H. pylori strains were vacA+; 39.2% were cagA+; 13.3% were cagA+ babA2+ and 8.4% were babA2+. Mexican strains examined possessed the vacA s1, m1 (43.4%), s1, m2 (24.5%), s2, m1 (20.3%) and s2, m2 (11.9%) genotypes.

conclusionThese results show that the Mexican patients suffering chronic gastritis we have studied had a high incidence of infection by H. pylori. Forty four percent (63/143) of the H. pylori strains analyzed in this work may be considered as highly virulent since they possessed two or three of the virulence markers analyzed: vacA s1 cagA babA2 (9.8%, 14/143), vacA s1 babA2 (4.9%, 7/143), and vacA s1 cagA (29.4%, 42/143). However, a statistically significant correlation was not observed between vacAs1, cagA and babA2 virulence markers (chi2 test; P > 0.05).

Indexed as

Adhesins, BacterialAdolescentAdultAgedAged, 80 and overAntigens, BacterialBacterial ProteinsBiomarkersChronic DiseaseFemaleGastritisGenotypeHelicobacter InfectionsHelicobacter pyloriHumansMaleAdhesins, BacterialAntigens, BacterialBabA protein, Helicobacter pyloriBacterial ProteinsBiomarkerscagA protein, Helicobacter pyloriVacA protein, Helicobacter pyloriVirulence Factors

Identifiers

PMID19405980
PMCPMC2683802
OpenAlexW2152462561

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.