Evidence map›Paper›PMID 19404259›Full record

ArticleNature2009

Precise genome modification in the crop species Zea mays using zinc-finger nucleases.

Vipula K Shukla, Yannick Doyon, Jeffrey C Miller, Russell C DeKelver, Erica A Moehle, Sarah E Worden, Jon C Mitchell, Nicole L Arnold, Sunita Gopalan, Xiangdong Meng and 15 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 288 papers.

0numbers the graph read from it
0cells of the map it votes in
288citing papers in PubMed
26.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

288 citing papers in PubMed, 946 citations in OpenAlex.

  1. Article
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  4. Article
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  9. Beyond a few bases: methods for large DNA insertion and gene targeting in plants.The Plant journal : for cell and molecular biology · 2025
    Review
  10. Review
  11. Article
  12. Article
  13. Review
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  15. CRISPR/Cas9-mediated genome editing technique to control fall armyworm (Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Review
  16. Review
  17. Recent Advances in Tomato Gene Editing.International journal of molecular sciences · 2024
    Review
  18. Article
  19. Review
  20. Review

228 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

25 authors at 2 institutions in 1 country.

Vipula K ShuklaDow AgroSciences, 9330 Zionsville Road, Indianapolis, Indiana 46268, USA. vkshukla@dow.com
Yannick Doyon
Jeffrey C Miller
Russell C DeKelver
Erica A Moehle
Sarah E Worden
Jon C Mitchell
Nicole L Arnold
Sunita Gopalan
Xiangdong Meng
Vivian M Choi
Jeremy M Rock
Ying-Ying Wu
George E Katibah
Gao Zhifang
David McCaskill
Matthew A Simpson
Beth Blakeslee
Scott A Greenwalt
Holly J Butler
Sarah J Hinkley
Lei Zhang
Edward J Rebar
Philip D Gregory
Fyodor D Urnov
Point Richmond Tech Center · USSangamo BioSciences (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Agricultural biotechnology is limited by the inefficiencies of conventional random mutagenesis and transgenesis. Because targeted genome modification in plants has been intractable, plant trait engineering remains a laborious, time-consuming and unpredictable undertaking. Here we report a broadly applicable, versatile solution to this problem: the use of designed zinc-finger nucleases (ZFNs) that induce a double-stranded break at their target locus. We describe the use of ZFNs to modify endogenous loci in plants of the crop species Zea mays. We show that simultaneous expression of ZFNs and delivery of a simple heterologous donor molecule leads to precise targeted addition of an herbicide-tolerance gene at the intended locus in a significant number of isolated events. ZFN-modified maize plants faithfully transmit these genetic changes to the next generation. Insertional disruption of one target locus, IPK1, results in both herbicide tolerance and the expected alteration of the inositol phosphate profile in developing seeds. ZFNs can be used in any plant species amenable to DNA delivery; our results therefore establish a new strategy for plant genetic manipulation in basic science and agricultural applications.

Indexed as

Zinc FingersBiotechnologyDeoxyribonucleasesFood, Genetically ModifiedGenes, PlantGene TargetingGenome, PlantHerbicide ResistanceHerbicidesHeredityInositol PhosphatesMutagenesis, Site-DirectedPlants, Genetically ModifiedRecombination, GeneticReproducibility of ResultsZea maysDeoxyribonucleasesHerbicidesInositol Phosphates

Identifiers

PMID19404259
OpenAlexW1993673609

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.