Evidence map›Paper›PMID 19403763›Full record

ArticleJournal of clinical microbiology2009

Pyrosequencing analysis of 20 nucleotides of internal transcribed spacer 2 discriminates Candida parapsilosis, Candida metapsilosis, and Candida orthopsilosis.

Andrew M Borman, Christopher J Linton, Debra Oliver, Michael D Palmer, Adrien Szekely, Frank C Odds, Elizabeth M Johnson

Abstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Review
  2. The first established microsatellite markers to distinguishJournal of clinical microbiology · 2023
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Evolution and Application of Inteins inFrontiers in microbiology · 2016
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Evaluation of matrix-assisted laser desorption/ionisation time-of-flight (MALDI-TOF) mass spectrometry for identification of Candida parapsilosis, C. orthopsilosis and C. metapsilosis.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2012
    Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Andrew M BormanMycology Reference Laboratory, Health Protection Agency, Bristol, United Kingdom. Andy.Borman@uhBristol.nhs.uk
Christopher J Linton
Debra Oliver
Michael D Palmer
Adrien Szekely
Frank C Odds
Elizabeth M Johnson

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Two new cryptic sister species, Candida orthopsilosis and Candida metapsilosis, were recently identified by consistent DNA sequence differences among several genes within the genetically heterogeneous Candida parapsilosis complex. Here, we present data demonstrating that Pyrosequencing analysis of 20 nucleotides of internal transcribed spacer region 2 rapidly and robustly distinguishes between these three closely related Candida species.

Indexed as

CandidaDNA, Ribosomal SpacerHumansSensitivity and SpecificitySequence Analysis, DNADNA, Ribosomal Spacer

Identifiers

PMID19403763
PMCPMC2708508

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.