Evidence map›Paper›PMID 19402206›Full record

ArticleBiochimica et biophysica acta2009

Bifunctional chimeric fusion proteins engineered for DNA delivery: optimization of the protein to DNA ratio.

Shan Gao, Melissa J Simon, Barclay Morrison, Scott Banta

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Shan GaoDepartment of Chemical Engineering, Columbia University in the City of New York, New York, NY 10027, USA.
Melissa J Simon
Barclay Morrison
Scott Banta
Columbia University · US

Funding

Delivery Systems for Precision Brain Cell TargetingR21MH080024 · NIMH · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI BANTA, SCOTT A · 2007 to 2008
$363k
NIMH NIH HHS R21 MH080024
6 · The paper itself

Abstract

backgroundCell penetrating peptides (CPPs) have been used to deliver nucleotide-based therapeutics to cells, but this approach has produced mixed results. Ionic interactions and covalent bonds between the CPPs and the cargos may inhibit the effectiveness of the CPPs or interfere with the bioactivity of the cargos.

methodsWe have created a bifunctional chimeric protein that binds DNA using the p50 domain of the NF-kappaB transcription factor and is functionalized for delivery with the TAT CPP. The green fluorescent protein (GFP) has been incorporated for tracking delivery. The new chimeric protein, p50-GFP-TAT, was compared to p50-GFP, GFP-TAT and GFP as controls for the ability to transduce PC12 cells with and without oligonucleotide cargos.

resultsThe p50-GFP-TAT construct can deliver 30 bp and 293 bp oligonucleotides to PC12 cells with an optimal ratio of 1.89 protein molecules per base pair of DNA length. This correlation was validated through the delivery of a fluorescent protein transgene encoded in a plasmid to PC12 cells. Thus, self-assembling CPP-based bifunctional fusion proteins can be engineered for the non-viral delivery of nucleotide-based cargos to mammalian cells. GENERAL SIGNIFICANCE: This work represents an important step forward in the rational design of protein-based systems for the delivery of macromolecular cargos.

Indexed as

Protein EngineeringAnimalsBase SequenceDNADNA PrimersElectrophoresis, Agar GelFlow CytometryGreen Fluorescent ProteinsPC12 CellsPlasmidsRatsRecombinant Fusion ProteinsTransgenesDNADNA PrimersGreen Fluorescent ProteinsRecombinant Fusion Proteins

Identifiers

PMID19402206
PMCPMC2927806
OpenAlexW2094458858

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.