Evidence map›Paper›PMID 19401682›Full record

ArticleMolecular psychiatry2010

High-density SNP association study and copy number variation analysis of the AUTS1 and AUTS5 loci implicate the IMMP2L-DOCK4 gene region in autism susceptibility.

E Maestrini, A T Pagnamenta, J A Lamb, E Bacchelli, N H Sykes, I Sousa, C Toma, G Barnby, H Butler, L Winchester and 15 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular psychiatry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 80 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
80citing papers in PubMed, 1 pooled it
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

80 citing papers in PubMed, 1 synthesis or guideline pooled it, 143 citations in OpenAlex.

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20 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 7 institutions in 4 countries.

E MaestriniDepartment of Biology, University of Bologna, Bologna, Italy.
A T Pagnamenta
J A Lamb
E Bacchelli
N H Sykes
I Sousa
C Toma
G Barnby
H Butler
L Winchester
T S Scerri
F Minopoli
J Reichert
G Cai
J D Buxbaum
O Korvatska
G D Schellenberg
G Dawson
A de Bildt
R B Minderaa
E J Mulder
A P Morris
A J Bailey
A P Monaco
IMGSAC
Centre for Human Genetics · GBUniversity Medical Center Groningen · NLAutism Speaks · USIcahn School of Medicine at Mount Sinai · USUniversity of Bologna · ITGeriatric Research Education and Clinical Center · USUniversity of Puget Sound · US

Funding

ZIPRASIDONE TREATMENT OF TOURETTE'S SYNDROME IN CHILDRENM01RR006022 · NCRR · YALE UNIVERSITY · PI KESSLER, DAVID A · 1990 to 2003
$6.7M
NEUROIMAGING STUDIES OF AUTISM SPECTRUM CONDITIONSU19HD035482 · NICHD · YALE UNIVERSITY · PI VOLKMAR, FRED ROBERT · 2002 to 2006
$6.7M
MOLECULAR GENETIC STUDIES OF CHILD PSYCHOPATHOLOGYK02MH001389 · NIMH · UNIVERSITY OF CHICAGO · PI COOK, EDWIN H · 1997 to 2001
$201k
DIAGNOSIS AND FOLLOWUP STUDIES OF AUTISTIC CHILDRENK05MH001196 · NIMH · UNIVERSITY OF CHICAGO · PI LORD, CATHERINE · 1994 to 1998
–
Medical Research Council G0601030NCRR NIH HHS M01 RR006022NCRR NIH HHS M01 RR06022NICHD NIH HHS U19 HD035482NICHD NIH HHS U19 HD35482NIMH NIH HHS K02 MH01389NIMH NIH HHS K05 MH01196Telethon GGP030227Wellcome Trust 059091Wellcome Trust 064890Wellcome Trust 075491Wellcome Trust 081682
6 · The paper itself

Abstract

Autism spectrum disorders are a group of highly heritable neurodevelopmental disorders with a complex genetic etiology. The International Molecular Genetic Study of Autism Consortium previously identified linkage loci on chromosomes 7 and 2, termed AUTS1 and AUTS5, respectively. In this study, we performed a high-density association analysis in AUTS1 and AUTS5, testing more than 3000 single nucleotide polymorphisms (SNPs) in all known genes in each region, as well as SNPs in non-genic highly conserved sequences. SNP genotype data were also used to investigate copy number variation within these regions. The study sample consisted of 127 and 126 families, showing linkage to the AUTS1 and AUTS5 regions, respectively, and 188 gender-matched controls. Further investigation of the strongest association results was conducted in an independent European family sample containing 390 affected individuals. Association and copy number variant analysis highlighted several genes that warrant further investigation, including IMMP2L and DOCK4 on chromosome 7. Evidence for the involvement of DOCK4 in autism susceptibility was supported by independent replication of association at rs2217262 and the finding of a deletion segregating in a sib-pair family.

Indexed as

Chromosomes, Human, Pair 2Chromosomes, Human, Pair 7AdultAutistic DisorderChildEndopeptidasesFemaleGene DosageGenetic Predisposition to DiseaseGenetic VariationGenotypeGTPase-Activating ProteinsHumansLinkage DisequilibriumMalePolymorphism, Single NucleotideDOCK4 protein, humanEndopeptidasesGTPase-Activating ProteinsIMMP2L protein, human

Identifiers

PMID19401682
PMCPMC2934739
OpenAlexW2121045992

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.