Evidence map›Paper›PMID 19401464›Full record

ArticleThe Journal of biological chemistry2009

Identification of interaction sites between human betaA3- and alphaA/alphaB-crystallins by mammalian two-hybrid and fluorescence resonance energy transfer acceptor photobleaching methods.

Ratna Gupta, Om P Srivastava

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Therapeutic potential of α-crystallin.Biochimica et biophysica acta · 2016
    Review
  3. Article
  4. Novel roles for α-crystallins in retinal function and disease.Progress in retinal and eye research · 2012
    Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Ratna GuptaDepartment of Vision Sciences, University of Alabama at Birmingham, Birmingham, Alabama 35294-4390, USA.
Om P Srivastava
University of Alabama at Birmingham · US

Funding

PROJECT 4 - POLYPHENOLS AND DAMAGE IN THE EYEP50AT000477 · NCCIH · PURDUE UNIVERSITY WEST LAFAYETTE · PI WEAVER, CONNIE MARIE · 2000 to 2010
$15.0M
PROTEINASE INHIBITORS &CRYSTALLIN FRAGMENTS IN CATARACTR01EY006400 · NEI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI SRIVASTAVA, OM PRAKASH · 1985 to 2018
$5.6M
ANTERIOR CHAMBER OF THE EYEZ01EY000303 · NEI · NATIONAL EYE INSTITUTE · PI RUSSELL, PAUL · 1995 to 2005
–
Intramural NIH HHS Z01 EY000303NCCIH NIH HHS P50 AT000477NCCIH NIH HHS P50 AT00477NEI NIH HHS EY06400NEI NIH HHS P30 EY0303NEI NIH HHS R01 EY006400
6 · The paper itself

Abstract

Our recent study has shown that betaA3-crystallin along with betaB1- and betaB2-crystallins were part of high molecular weight complex obtained from young, old, and cataractous lenses suggesting potential interactions between alpha- and beta-crystallins (Srivastava, O. P., Srivastava, K., and Chaves, J. M. (2008) Mol. Vis. 14, 1872-1885). To investigate this further, this study was carried out to determine the interaction sites of betaA3-crystallin with alphaA- and alphaB-crystallins. The study employed a mammalian two-hybrid method, an in vivo assay to determine the regions of betaA3-crystallin that interact with alphaA- and alphaB-crystallins. Five regional truncated mutants of betaA3-crystallin were generated using specific primers with deletions of N-terminal extension (NT) (named betaA3-NT), N-terminal extension plus motif I (named betaA3-NT + I), N-terminal extension plus motifs I and II (named betaA3-NT + I + II), motif III plus IV (named betaA3-III + IV), and motif IV (named betaA3-IV). The mammalian two-hybrid studies were complemented with fluorescence resonance energy transfer acceptor photobleaching studies using the above described mutant proteins, fused with DsRed (Red) and AcGFP fluorescent proteins. The results showed that the motifs III and IV of betaA3-crystallin were interactive with alphaA-crystallin, and motifs II and III of betaA3-crystallin primarily interacted with alphaB-crystallin.

Indexed as

Protein Interaction Domains and Motifsalpha-Crystallin B Chainbeta-Crystallin A ChainBinding SitesCrystallinsFluorescence Resonance Energy TransferHeLa CellsHumansMolecular WeightMutagenesisPhotobleachingSolubilityTransfectionTwo-Hybrid System Techniquesalpha-Crystallin B Chainbeta-Crystallin A ChainCRYAA protein, humanCRYAB protein, humanCRYBA1 protein, humanCrystallins

Identifiers

PMID19401464
PMCPMC2709387
OpenAlexW2083797945

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.