Evidence map›Paper›PMID 19401450›Full record

ArticleCancer research2009

Identification of PDE4D as a proliferation promoting factor in prostate cancer using a Sleeping Beauty transposon-based somatic mutagenesis screen.

Eric P Rahrmann, Lara S Collier, Todd P Knutson, Meghan E Doyal, Sheri L Kuslak, Laura E Green, Rita L Malinowski, Laura Roethe, Keiko Akagi, Michelle Waknitz and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 91 citations in OpenAlex.

  1. Trial
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  5. Review
  6. Article
  7. Article
  8. Pan-cancer analysis of theOpen medicine (Warsaw, Poland) · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. PDE4 subtypes in cancer.Oncogene · 2020
    Review
  15. Review
  16. Article
  17. Review
  18. High expression ofWorld journal of gastroenterology · 2019
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Eric P RahrmannDepartment of Genetics, Cell Biology, and Development and Masonic Cancer Center, University of Minnesota, Minneapolis, MN, USA.
Lara S Collier
Todd P Knutson
Meghan E Doyal
Sheri L Kuslak
Laura E Green
Rita L Malinowski
Laura Roethe
Keiko Akagi
Michelle Waknitz
Wei Huang
David A Largaespada
Paul C Marker
University of Minnesota · USUniversity of Wisconsin Carbone Cancer Center · USUniversity of Wisconsin–Madison · USCancer Genetics (United States) · USPalmetto Hematology Oncology · US

Funding

TRAINING GRANT IN MICROBIOLOGY/CANCER RESEARCHT32CA009138 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI Scott M. Dehm · 1985 to 2026
$11.3M
Xenograft Core for NF1 Experimental TherapeuticsP50NS057531 · NINDS · CINCINNATI CHILDRENS HOSP MED CTR · PI THOMAS, GEORGE · 2008 to 2012
$6.8M
Sleeping Beauty for uncovering cancer genes in miceR01CA113636 · NCI · UNIVERSITY OF MINNESOTA · PI LARGAESPADA, DAVID ANDREW · 2006 to 2016
$2.5M
Steroid hormones and SFRP1 in the age-related incidence of BPH and BOOR01DK091193 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI MARKER, PAUL C · 2011 to 2015
$1.6M
Transposon-based screens for colorectal cancer genesR01CA134759 · NCI · UNIVERSITY OF MINNESOTA · PI CORMIER, ROBERT T, LARGAESPADA, DAVID ANDREW · 2009 to 2013
$1.5M
Genetic Analysis of a Prostate Tumor Suppressor RegionR01AG024278 · NIA · UNIVERSITY OF WISCONSIN-MADISON · PI MARKER, PAUL C · 2006 to 2010
$1.5M
Sleeping Beauty for cancer gene discoveryK01CA122183 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI COLLIER, LARA S · 2006 to 2010
$729k
Transposon-based somatic mutagenesis/prostate cancer geneticsR21CA118600 · NCI · UNIVERSITY OF MINNESOTA · PI LARGAESPADA, DAVID ANDREW · 2006 to 2007
$385k
NCI NIH HHS CA09138NCI NIH HHS CA118600NCI NIH HHS CA122183NCI NIH HHS K01 CA122183NCI NIH HHS R01 CA113636NCI NIH HHS R01 CA134759NCI NIH HHS R21 CA118600NCI NIH HHS T32 CA009138NIA NIH HHS AG024278NIA NIH HHS R01 AG024278NIDDK NIH HHS R01 DK091193NINDS NIH HHS P50 NS057531
6 · The paper itself

Abstract

Retroviral and transposon-based mutagenesis screens in mice have been useful for identifying candidate cancer genes for some tumor types. However, many of the organs that exhibit the highest cancer rates in humans, including the prostate, have not previously been amenable to these approaches. This study shows for the first time that the Sleeping Beauty transposon system can be used to identify candidate prostate cancer genes in mice. Somatic mobilization of a mutagenic transposon resulted in focal epithelial proliferation and hyperplasia in the prostate. Efficient methods were established to identify transposon insertion sites in these lesions, and analysis of transposon insertions identified candidate prostate cancer genes at common insertion sites, including Pde4d. PDE4D was also overexpressed in human prostate cancer patient samples and cell lines, and changes in PDE4D mRNA isoform expression were observed in human prostate cancers. Furthermore, knockdown of PDE4D reduced the growth and migration of prostate cancer cells in vitro, and knockdown of PDE4D reduced the growth and proliferation rate of prostate cancer xenografts in vivo. These data indicate that PDE4D functions as a proliferation promoting factor in prostate cancer, and the Sleeping Beauty transposon system is a useful tool for identifying candidate prostate cancer genes.

Indexed as

AnimalsCell DivisionCyclic Nucleotide Phosphodiesterases, Type 4DNA, ComplementaryDNA, NeoplasmGene AmplificationGene Expression Regulation, NeoplasticKi-67 AntigenMaleMiceMice, NudeMutagenesisPolymerase Chain ReactionProstatic NeoplasmsProtein IsoformsRNA Ligase (ATP)Cyclic Nucleotide Phosphodiesterases, Type 4DNA, ComplementaryDNA, NeoplasmKi-67 AntigenMki67 protein, mousePDE4D protein, mouseProtein IsoformsRNA Ligase (ATP)RNA, NeoplasmTransposases

Identifiers

PMID19401450
PMCPMC2710962
OpenAlexW2140536163

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.