Evidence map›Paper›PMID 19400839›Full record

ArticleMolecular plant pathology2009

Molecular cloning and characterization of the AVR-Pia locus from a Japanese field isolate of Magnaporthe oryzae.

Shinsuke Miki, Kotaro Matsui, Hideki Kito, Keisuke Otsuka, Taketo Ashizawa, Nobuko Yasuda, Satoru Fukiya, Junko Sato, Kazuyuki Hirayae, Yoshikatsu Fujita and 3 more

Abstract read
In one paragraph

Article in Molecular plant pathology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Article
  2. A century of advances in molecular genetics and breeding for sustainable resistance to rice blast disease.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Review
  3. Article
  4. Pyricularia oryzae: Lab star and field scourge.Molecular plant pathology · 2024
    Review
  5. Review
  6. The Devastating Rice Blast Airborne PathogenPathogens (Basel, Switzerland) · 2023
    Review
  7. Article
  8. Review
  9. Understanding the Dynamics of Blast Resistance in Rice-Journal of fungi (Basel, Switzerland) · 2022
    Review
  10. Article
  11. The Secreted Protein MoHrip1 Is Necessary for the Virulence ofInternational journal of molecular sciences · 2019
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Shinsuke MikiGraduate School of Agriculture, Hokkaido University, Sapporo, Japan.
Kotaro Matsui
Hideki Kito
Keisuke Otsuka
Taketo Ashizawa
Nobuko Yasuda
Satoru Fukiya
Junko Sato
Kazuyuki Hirayae
Yoshikatsu Fujita
Toshihiko Nakajima
Fusao Tomita
Teruo Sone

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In order to clone and analyse the avirulence gene AVR-Pia from Japanese field isolates of Magnaporthe oryzae, a mutant of the M. oryzae strain Ina168 was isolated. This mutant, which was named Ina168m95-1, gained virulence towards the rice cultivar Aichi-asahi, which contains the resistance gene Pia. A DNA fragment (named PM01) that was deleted in the mutant and that co-segregated with avirulence towards Aichi-asahi was isolated. Three cosmid clones that included the regions that flanked PM01 were isolated from a genomic DNA library. One of these clones (46F3) complemented the mutant phenotype, which indicated clearly that this clone contained the avirulence gene AVR-Pia. Clone 46F3 contained insertions of transposable elements. The 46F3 insert was divided into fragments I-VI, and these were cloned individually into a hygromycin-resistant vector for the transformation of the mutant Ina168m95-1. An inoculation assay of the transformants revealed that fragment V (3.5 kb) contained AVR-Pia. By deletion analysis of fragment V, AVR-Pia was localized to an 1199-bp DNA fragment, which included a 255-bp open reading frame with weak homology to a bacterial cytochrome-c-like protein. Restriction fragment length polymorphism analysis of this region revealed that this DNA sequence co-segregated with the AVR-Pia locus in a genetic map that was constructed using Chinese isolates.

Indexed as

AgricultureGenes, FungalBase PairingBase SequenceChromosome SegregationCloning, MolecularConserved SequenceCosmidsCrosses, GeneticDNA, FungalGenetic Complementation TestJapanMagnaportheMolecular Sequence DataOpen Reading FramesOryzaDNA, Fungal

Identifiers

PMID19400839
PMCPMC6640357

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.