Evidence map›Paper›PMID 19399371›Full record

ArticleJournal of biomolecular NMR2009

Optimized bacterial expression and purification of the c-Src catalytic domain for solution NMR studies.

Andrea Piserchio, Ranajeet Ghose, David Cowburn

Abstract read
In one paragraph

Article in Journal of biomolecular NMR, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Expression and purification of Src-family kinases for solution NMR studies.Methods in molecular biology (Clifton, N.J.) · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Andrea PiserchioNew York Structural Biology Center, 89 Convent Avenue, New York, NY 10027-7556, USA.
Ranajeet Ghose
David Cowburn

Funding

TNC FUNCTION IN APOPTOTIC ANTIGEN DRIVEN AUTOIMMUNITYG12RR003060 · NCRR · CITY COLLEGE OF NEW YORK · PI GUYDEN, JERRY · 1985 to 2011
$26.1M
900 MHz NMR Spectrometer for Structural BiologyP41GM066354 · NIGMS · NEW YORK STRUCTURAL BIOLOGY CENTER · PI COWBURN, DAVID · 2002 to 2006
$4.7M
Structural Biology of Protein KinasesR01GM047021 · NIGMS · ROCKEFELLER UNIVERSITY · PI COWBURN, DAVID · 1992 to 2008
$2.4M
Catalytic Domain Dynamics in Protein KinasesR01GM084278 · NIGMS · CITY COLLEGE OF NEW YORK · PI GHOSE, RANAJEET · 2009 to 2013
$1.6M
NCRR NIH HHS G12 RR003060NCRR NIH HHS G12 RR03060NIGMS NIH HHS P41 GM066354NIGMS NIH HHS R01 GM047021NIGMS NIH HHS R01 GM084278
6 · The paper itself

Abstract

Progression of a host of human cancers is associated with elevated levels of expression and catalytic activity of the Src family of tyrosine kinases (SFKs), making them key therapeutic targets. Even with the availability of multiple crystal structures of active and inactive forms of the SFK catalytic domain (CD), a complete understanding of its catalytic regulation is unavailable. Also unavailable are atomic or near-atomic resolution information about their interactions, often weak or transient, with regulating phosphatases and downstream targets. Solution NMR, the biophysical method best suited to tackle this problem, was previously hindered by difficulties in bacterial expression and purification of sufficient quantities of soluble, properly folded protein for economically viable labeling with NMR-active isotopes. Through a choice of optimal constructs, co-expression with chaperones and optimization of the purification protocol, we have achieved the ability to bacterially produce large quantities of the isotopically-labeled CD of c-Src, the prototypical SFK, and of its activating Tyr-phosphorylated form. All constructs produce excellent spectra allowing solution NMR studies of this family in an efficient manner.

Indexed as

Nuclear Magnetic Resonance, BiomolecularAnimalsChickensEscherichia coliPhosphorylationProto-Oncogene Proteins pp60(c-src)Recombinant Proteinssrc Homology DomainsProto-Oncogene Proteins pp60(c-src)Recombinant Proteins

Identifiers

PMID19399371
PMCPMC2735562

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.