ArticleThe Journal of general physiology2009
Ionic selectivity in L-type calcium channels by electrostatics and hard-core repulsion.
Article in The Journal of general physiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.
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Who cites it
29 citing papers in PubMed, 103 citations in OpenAlex.
- A Model Framework for Ion Channels with Selectivity Filters Based on Non-Equilibrium Thermodynamics.Entropy (Basel, Switzerland) · 2025Article
- Effect of Eugenol on Detrusor Muscle: Potential for Overactive Bladder Treatment.International neurourology journal · 2024Article
- Combined effect of confinement and dielectric exclusion on ion adsorption in slits, pores, and cavities.AIP advances · 2024Article
- Probing ion binding in the selectivity filter of the CaBiophysical journal · 2023Article
- Setting Boundaries for Statistical Mechanics.Molecules (Basel, Switzerland) · 2022Review
- Lithium administered to pregnant, lactating and neonatal rats: entry into developing brain.Fluids and barriers of the CNS · 2021Article
- Maxwell Equations without a Polarization Field, Using a Paradigm from Biophysics.Entropy (Basel, Switzerland) · 2021Article
- Modeling the Device Behavior of Biological and Synthetic Nanopores with Reduced Models.Entropy (Basel, Switzerland) · 2020Article
- 1,8-Cineole blocks voltage-gated L-type calcium channels in tracheal smooth muscle.Pflugers Archiv : European journal of physiology · 2018Article
- Understanding Sodium Channel Function and Modulation Using Atomistic Simulations of Bacterial Channel Structures.Current topics in membranes · 2016Article
- Ion conduction and conformational flexibility of a bacterial voltage-gated sodium channel.Proceedings of the National Academy of Sciences of the United States of America · 2014Article
- Interacting ions in biophysics: real is not ideal.Biophysical journal · 2013Review
- Ion correlations in nanofluidic channels: effects of ion size, valence, and concentration on voltage- and pressure-driven currents.Langmuir : the ACS journal of surfaces and colloids · 2013Article
- Article
- Ionizable side chains at catalytic active sites of enzymes.European biophysics journal : EBJ · 2012Article
- Current and selectivity in a model sodium channel under physiological conditions: Dynamic Monte Carlo simulations.Biochimica et biophysica acta · 2012Article
- A method for treating the passage of a charged hard sphere ion as it passes through a sharp dielectric boundary.The Journal of chemical physics · 2011Article
- Selectivity sequences in a model calcium channel: role of electrostatic field strength.European biophysics journal : EBJ · 2011Article
- Poisson-Nernst-Planck equations for simulating biomolecular diffusion-reaction processes II: size effects on ionic distributions and diffusion-reaction rates.Biophysical journal · 2011Article
- Analyzing the components of the free-energy landscape in a calcium selective ion channel by Widom's particle insertion method.The Journal of chemical physics · 2011Article
Corrections and comments
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Authors and funding
6 authors at 4 institutions in 2 countries.
Funding
Abstract
A physical model of selective "ion binding" in the L-type calcium channel is constructed, and consequences of the model are compared with experimental data. This reduced model treats only ions and the carboxylate oxygens of the EEEE locus explicitly and restricts interactions to hard-core repulsion and ion-ion and ion-dielectric electrostatic forces. The structural atoms provide a flexible environment for passing cations, thus resulting in a self-organized induced-fit model of the selectivity filter. Experimental conditions involving binary mixtures of alkali and/or alkaline earth metal ions are computed using equilibrium Monte Carlo simulations in the grand canonical ensemble. The model pore rejects alkali metal ions in the presence of biological concentrations of Ca(2+) and predicts the blockade of alkali metal ion currents by micromolar Ca(2+). Conductance patterns observed in varied mixtures containing Na(+) and Li(+), or Ba(2+) and Ca(2+), are predicted. Ca(2+) is substantially more potent in blocking Na(+) current than Ba(2+). In apparent contrast to experiments using buffered Ca(2+) solutions, the predicted potency of Ca(2+) in blocking alkali metal ion currents depends on the species and concentration of the alkali metal ion, as is expected if these ions compete with Ca(2+) for the pore. These experiments depend on the problematic estimation of Ca(2+) activity in solutions buffered for Ca(2+) and pH in a varying background of bulk salt. Simulations of Ca(2+) distribution with the model pore bathed in solutions containing a varied amount of Li(+) reveal a "barrier and well" pattern. The entry/exit barrier for Ca(2+) is strongly modulated by the Li(+) concentration of the bath, suggesting a physical explanation for observed kinetic phenomena. Our simulations show that the selectivity of L-type calcium channels can arise from an interplay of electrostatic and hard-core repulsion forces among ions and a few crucial channel atoms. The reduced system selects for the cation that delivers the largest charge in the smallest ion volume.
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