Evidence map›Paper›PMID 19398768›Full record

ArticleGenetics2009

Evidence that msh1p plays multiple roles in mitochondrial base excision repair.

Leah Pogorzala, Shona Mookerjee, Elaine A Sia

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Expansion of the MutS Gene Family in Plants.bioRxiv : the preprint server for biology · 2024
    Article
  3. Article
  4. Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  5. Frontiers in cellular and infection microbiology · 2020
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Leah PogorzalaDepartment of Biology, University of Rochester, Rochester, New York 14627, USA. esia@mail.rochester.edu
Shona Mookerjee
Elaine A Sia
University of Rochester · US

Funding

DNA Repair and Mutagenesis in S cerevisiaeR01GM063626 · NIGMS · UNIVERSITY OF ROCHESTER · PI SIA, ELAINE A · 2001 to 2005
$1.3M
NIGMS NIH HHS GM63626NIGMS NIH HHS R01 GM063626
6 · The paper itself

Abstract

Mitochondrial DNA is thought to be especially prone to oxidative damage by reactive oxygen species generated through electron transport during cellular respiration. This damage is mitigated primarily by the base excision repair (BER) pathway, one of the few DNA repair pathways with confirmed activity on mitochondrial DNA. Through genetic epistasis analysis of the yeast Saccharomyces cerevisiae, we examined the genetic interaction between each of the BER proteins previously shown to localize to the mitochondria. In addition, we describe a series of genetic interactions between BER components and the MutS homolog MSH1, a respiration-essential gene. We show that, in addition to their variable effects on mitochondrial function, mutant msh1 alleles conferring partial function interact genetically at different points in mitochondrial BER. In addition to this separation of function, we also found that the role of Msh1p in BER is unlikely to be involved in the avoidance of large-scale deletions and rearrangements.

Indexed as

DNA RepairMutationAdenosine TriphosphatasesAdenosine TriphosphateBase SequenceCell NucleusDNA-(Apurinic or Apyrimidinic Site) LyaseDNA-Binding ProteinsDNA, FungalDNA, MitochondrialDNA Repair EnzymesEndodeoxyribonucleasesEpistasis, GeneticFungal ProteinsGene DeletionMitochondrial ProteinsAdenosine TriphosphatasesAdenosine TriphosphateApn1 protein, S cerevisiaeDNA-(Apurinic or Apyrimidinic Site) LyaseDNA-Binding ProteinsDNA, FungalDNA, MitochondrialDNA Repair EnzymesEndodeoxyribonucleasesFungal ProteinsMitochondrial ProteinsMSH1 protein, S cerevisiaeNTG1 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID19398768
PMCPMC2710152
OpenAlexW2114233205

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.