Evidence map›Paper›PMID 19398505›Full record

ReviewBriefings in functional genomics & proteomics2009

Quantitative strategies to fuel the merger of discovery and hypothesis-driven shotgun proteomics.

Kelli G Kline, Greg L Finney, Christine C Wu

Abstract readReview
In one paragraph

Review in Briefings in functional genomics & proteomics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Kelli G KlineNRSA, Wu laboratory.
Greg L Finney
Christine C Wu

Funding

Quantitative Proteomic Analysis of the Intact Human HeartF31AA017341 · NIAAA · UNIVERSITY OF COLORADO DENVER · PI KLINE, KELLI G. · 2007 to 2008
$46k
NIAAA NIH HHS F31 AA017341
6 · The paper itself

Abstract

The ultimate goal of most shotgun proteomic pipelines is the discovery of novel biomarkers to direct the development of quantitative diagnostics for the detection and treatment of disease. Differential comparisons of biological samples identify candidate peptides that can serve as proxys of candidate proteins. While these discovery approaches are robust and fairly comprehensive, they have relatively low throughput. When merged with targeted mass spectrometry, this pipeline can fuel hypothesis-driven studies and the development of novel diagnostics and therapeutics.

Indexed as

BiomarkersGene Expression ProfilingHumansIsotopesMass SpectrometryMyocardiumPeptidesProteinsProteomicsTandem Mass SpectrometryBiomarkersIsotopesPeptidesProteins

Identifiers

PMID19398505
PMCPMC3105289

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.