Evidence map›Paper›PMID 19397400›Full record

ArticleAIDS research and human retroviruses2009

Analysis of the V1V2 region of the SIV envelope in the brains of morphine-dependent and control SIV/SHIV-infected macaques.

Vanessa Rivera-Amill, Richard J Noel, Ivelisse Rivera Román, Yashira García Flores, Shilpa Buch, Anil Kumar

Open access · greenAbstract read
In one paragraph

Article in AIDS research and human retroviruses, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Translational research in NeuroAIDS: a neuroimmune pharmacology-related course.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2011
    Article
  3. Morphine and rapid disease progression in nonhuman primate model of AIDS: inverse correlation between disease progression and virus evolution.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Vanessa Rivera-AmillDepartment of Microbiology, Ponce School of Medicine, Ponce, Puerto Rico 00732.
Richard J Noel
Ivelisse Rivera Román
Yashira García Flores
Shilpa Buch
Anil Kumar
Ponce Health Sciences University · PRUniversity of Kansas Medical Center · US

Funding

VIRAL SEQUENCES IN PEDIATRIC HIV INFECTION IN PRG12RR003050 · NCRR · PONCE SCHOOL OF MEDICINE · PI ARMSTRONG, RAUL A · 1985 to 2011
$28.1M
Therapeutic Immunization in Monkey Model of AIDSS06GM008239 · NIGMS · PONCE SCHOOL OF MEDICINE · PI MATTA, JAIME L · 1989 to 2009
$21.5M
Efffects of opiate virus/host response in SHIV/macaqueR01DA015013 · NIDA · UNIVERSITY OF MISSOURI KANSAS CITY · PI KUMAR, ANIL · 2001 to 2011
$3.1M
NCRR NIH HHS G12 RR003050NIDA NIH HHS DA015013NIDA NIH HHS R01 DA015013NIGMS NIH HHS GM008239NIGMS NIH HHS S06 GM008239
6 · The paper itself

Abstract

Six morphine-dependent and three control macaques were infected with a mixture of SIV/SHIV. Half of the animals in the morphine group developed accelerated disease (rapid progressor) and died within 20 weeks postinfection. The evolution of the envelope gene in the brain of the rapid progressor and morphine-dependent group along with that in the control group was assessed. Six to 10 clones from the brain of each macaque were sequenced and were compared against each other as well as against a challenge virus. Analysis of the sequences revealed that the diversity and divergence of the clones were higher in the control group as compared to the morphine-dependent macaques, although this difference was not statistically significant.

Indexed as

Amino Acid SequenceAnimalsBrainMacacaMolecular Sequence DataMorphine DependencePolymorphism, GeneticRetroviridae ProteinsSequence AlignmentSequence Analysis, DNASimian Acquired Immunodeficiency SyndromeSimian Immunodeficiency VirusViral Envelope ProteinsRetroviridae ProteinsSIV envelope protein gp110Viral Envelope Proteins

Identifiers

PMID19397400
PMCPMC2853860
OpenAlexW1964712930

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.