Evidence map›Paper›PMID 19395640›Full record

ArticleDevelopment (Cambridge, England)2009

Mutations in zebrafish leucine-rich repeat-containing six-like affect cilia motility and result in pronephric cysts, but have variable effects on left-right patterning.

Fabrizio C Serluca, Bo Xu, Noriko Okabe, Kari Baker, Shin-Yi Lin, Jessica Sullivan-Brown, David J Konieczkowski, Kimberly M Jaffe, Joshua M Bradner, Mark C Fishman and 1 more

Open access · greenAbstract read
In one paragraph

Article in Development (Cambridge, England), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed, 1 pooled it
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 1 synthesis or guideline pooled it, 53 citations in OpenAlex.

  1. Laterality defects are influenced by timing of treatments and animal model.Differentiation; research in biological diversity · 2012
    Pooled it
  2. Article
  3. Article
  4. Article
  5. Aquatic models of human ciliary diseases.Genesis (New York, N.Y. : 2000) · 2021
    Review
  6. Article
  7. Article
  8. Zebrafish as a Model for Human Ciliopathies.Journal of genetics and genomics = Yi chuan xue bao · 2016
    Review
  9. Article
  10. Article
  11. Cdc42 and sec10 Are Required for Normal Retinal Development in Zebrafish.Investigative ophthalmology & visual science · 2015
    Article
  12. Mechanisms of otoconia and otolith development.Developmental dynamics : an official publication of the American Association of Anatomists · 2015
    Review
  13. Review
  14. Review
  15. Article
  16. Article
  17. Cdc42 deficiency causes ciliary abnormalities and cystic kidneys.Journal of the American Society of Nephrology : JASN · 2013
    Article
  18. Article
  19. Article
  20. Reptin/Ruvbl2 is a Lrrc6/Seahorse interactor essential for cilia motility.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Fabrizio C SerlucaMassachusetts General Hospital, Charlestown, MA 02129, USA. fabrizio.serluca@novartis.com
Bo Xu
Noriko Okabe
Kari Baker
Shin-Yi Lin
Jessica Sullivan-Brown
David J Konieczkowski
Kimberly M Jaffe
Joshua M Bradner
Mark C Fishman
Rebecca D Burdine
Princeton University · USMassachusetts General Hospital · US

Funding

Spatial Patterning During DevelopmentP50GM071508 · NIGMS · PRINCETON UNIVERSITY · PI POWELL, SUSAN M · 2004 to 2013
$30.6M
Connecting Polycystin Signaling to Asymmetric Nodal ExpressionR01HD048584 · NICHD · PRINCETON UNIVERSITY · PI BURDINE, REBECCA D. · 2007 to 2016
$3.5M
NICHD NIH HHS 1R01HD048584NICHD NIH HHS R01 HD048584NIGMS NIH HHS P50 GM071508NIGMS NIH HHS P50GM071508
6 · The paper itself

Abstract

Cilia defects have been implicated in a variety of human diseases and genetic disorders, but how cilia motility contributes to these phenotypes is still unknown. To further our understanding of how cilia function in development, we have cloned and characterized two alleles of seahorse, a zebrafish mutation that results in pronephric cysts. seahorse encodes Lrrc6l, a leucine-rich repeat-containing protein that is highly conserved in organisms that have motile cilia. seahorse is expressed in zebrafish tissues known to contain motile cilia. Although mutants do not affect cilia structure and retain the ability to interact with Disheveled, both alleles of seahorse strongly affect cilia motility in the zebrafish pronephros and neural tube. Intriguingly, although seahorse mutations variably affect fluid flow in Kupffer's vesicle, they can have very weak effects on left-right patterning. Combined with recently published results, our alleles suggest that the function of seahorse in cilia motility is separable from its function in other cilia-related phenotypes.

Indexed as

Amino Acid SequenceAnimalsBody PatterningCiliaMolecular Sequence DataMutationNeural TubeZebrafishZebrafish ProteinsLrrc6 protein, zebrafishZebrafish Proteins

Identifiers

PMID19395640
PMCPMC2673758
OpenAlexW1970938670

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.