Evidence map›Paper›PMID 19395480›Full record

ArticleJournal of bacteriology2009

In vivo sensitivity of blue-light-dependent signaling mediated by AppA/PpsR or PrrB/PrrA in Rhodobacter sphaeroides.

Sebastian Metz, Andreas Jäger, Gabriele Klug

Abstract read
In one paragraph

Article in Journal of bacteriology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Regulation of bacterial photosynthesis genes by the small noncoding RNA PcrZ.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Sebastian MetzInstitut für Mikro- und Molekularbiologie, University of Giessen, Giessen, Germany.
Andreas Jäger
Gabriele Klug

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Formation of photosynthesis complexes in Rhodobacter sphaeroides is regulated in a redox- and light-dependent manner by the AppA/PpsR and PrrB/PrrA systems. While on the one hand, blue light is sensed by the flavin adenine dinucleotide-binding BLUF domain of AppA, on the other, light is absorbed by bacteriochlorophyll signals through PrrB/PrrA. We show that much smaller quantities initiate the AppA-mediated response to blue light than the bacteriochlorophyll-mediated response.

Indexed as

Bacterial ProteinsBlotting, NorthernDNA-Binding ProteinsFlavoproteinsGene Expression Regulation, BacterialLight Signal TransductionRepressor ProteinsReverse Transcriptase Polymerase Chain ReactionRhodobacter sphaeroidesAppA protein, Rhodobacter sphaeroidesBacterial ProteinsDNA-Binding ProteinsFlavoproteinsRepressor Proteins

Identifiers

PMID19395480
PMCPMC2698482

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.