Evidence map›Paper›PMID 19394293›Full record

ArticleMolecular cell2009

An alpha motif at Tas3 C terminus mediates RITS cis spreading and promotes heterochromatic gene silencing.

Haitao Li, Mohammad R Motamedi, Calvin K Yip, Zhanxin Wang, Thomas Walz, Dinshaw J Patel, Danesh Moazed

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Challenging dogmas: How transgenerational epigenetics reshapes our views on life.Journal of experimental zoology. Part A, Ecological and integrative physiology · 2022
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  3. Review
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  8. Article
  9. Article
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  12. Regulation of histone methylation by noncoding RNAs.Biochimica et biophysica acta · 2014
    Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Chromatin higher-order structure and dynamics.Cold Spring Harbor perspectives in biology · 2010
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Haitao LiStructural Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA.
Mohammad R Motamedi
Calvin K Yip
Zhanxin Wang
Thomas Walz
Dinshaw J Patel
Danesh Moazed
Harvard University · USMemorial Sloan Kettering Cancer Center · USHoward Hughes Medical Institute · US

Funding

Y-FAMILY POLYMERASES AND CO-FACTORS IN TRANSLESION REPLICATIONP41RR015301 · NCRR · CORNELL UNIVERSITY ITHACA · PI EISENBERG, DAVID · 2001 to 2011
$28.2M
Case Center for Synchrotron BiosciencesP30EB009998 · NIBIB · CASE WESTERN RESERVE UNIVERSITY · PI CHANCE, MARK R · 2009 to 2018
$8.4M
RNAi-mediated Targeting of Hetorochromatin AssemblyR01GM072805 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI MOAZED, DANESH · 2005 to 2025
$6.9M
Howard Hughes Medical InstituteNCRR NIH HHS P41 RR015301NIBIB NIH HHS P30 EB009998NIGMS NIH HHS R01 GM072805
6 · The paper itself

Abstract

RNA interference (RNAi) plays a pivotal role in the formation of heterochromatin at the fission yeast centromeres. The RNA-induced transcriptional silencing (RITS) complex, composed of heterochromatic small interfering RNAs (siRNAs), the siRNA-binding protein Ago1, the chromodomain protein Chp1, and the Ago1/Chp1-interacting protein Tas3, provides a physical tether between the RNAi and heterochromatin assembly pathways. Here, we report the structural and functional characterization of a C-terminal Tas3 alpha-helical motif (TAM), which self-associates into a helical polymer and is required for cis spreading of RITS in centromeric DNA regions. Site-directed mutations of key residues within the hydrophobic monomer-monomer interface disrupt Tas3-TAM polymeric self-association in vitro and result in loss of gene silencing, spreading of RITS, and a dramatic reduction in centromeric siRNAs in vivo. These results demonstrate that, in addition to the chromodomain of Chp1 and siRNA-loaded Ago1, Tas3 self-association is required for RITS spreading and efficient heterochromatic gene silencing at centromeric repeat regions.

Indexed as

Amino Acid MotifsCarrier ProteinsCentromereChromatin Assembly and DisassemblyChromatin ImmunoprecipitationChromatography, GelCrystallography, X-RayGene SilencingHeterochromatinHistonesLysineMethylationModels, MolecularMutagenesis, Site-DirectedProtein Structure, TertiaryRNA-Induced Silencing ComplexCarrier ProteinsHeterochromatinHistonesLysineRNA-Induced Silencing ComplexRNA, Small InterferingSchizosaccharomyces pombe ProteinsTas3 protein, S pombe

Identifiers

PMID19394293
PMCPMC2756231
OpenAlexW2122837076

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.