Evidence map›Paper›PMID 19393692›Full record

ArticleJournal of neuroscience methods2009

An efficient and reproducible method for quantifying macrophages in different experimental models of central nervous system pathology.

Dustin J Donnelly, John C Gensel, Daniel P Ankeny, Nico van Rooijen, Phillip G Popovich

Open access · greenAbstract readComparative Study
In one paragraph

Article in Journal of neuroscience methods, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 80 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
80citing papers in PubMed, 1 pooled it
5.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

80 citing papers in PubMed, 1 synthesis or guideline pooled it, 127 citations in OpenAlex.

  1. Macrophage migration inhibitory factor as a therapeutic target after traumatic spinal cord injury: a systematic review.European spine journal : official publication of the European Spine Society, the European Spinal Deformity Society, and the European Section of the Cervical Spine Research Society · 2021
    Pooled it
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  6. Female-specific neuroprotection after ischemic stroke by vitronectin-focal adhesion kinase inhibition.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2022
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  15. Frontiers in cellular neuroscience · 2020
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  17. Tracking the evolution of CNS remyelinating lesion in mice with neutral red dye.Proceedings of the National Academy of Sciences of the United States of America · 2019
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20 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Dustin J DonnellyThe Integrated Biomedical Graduate Studies Program, The Ohio State University College of Medicine, Columbus, OH, USA.
John C Gensel
Daniel P Ankeny
Nico van Rooijen
Phillip G Popovich
The Ohio State University · USInstitute for Behavioral Medicine · USVrije Universiteit Amsterdam · NL

Funding

T-cell Functions in the Injured Spinal CordR01NS047175 · NINDS · OHIO STATE UNIVERSITY · PI POPOVICH, PHILLIP G · 2003 to 2013
$3.3M
MACROPHAGE HETEROGENEITY AFTER SPINAL CORD INJURYR01NS037846 · NINDS · OHIO STATE UNIVERSITY · PI POPOVICH, PHILLIP G · 1999 to 2008
$2.7M
NINDS NIH HHS NS37846NINDS NIH HHS R01 NS037846NINDS NIH HHS R01 NS047175
6 · The paper itself

Abstract

Historically, microglia/macrophages are quantified in the pathological central nervous system (CNS) by counting cell profiles then expressing the data as cells/mm(2). However, because it is difficult to visualize individual cells in dense clusters and in most cases it is unimportant to know the absolute number of macrophages within lesioned tissue, alternative methods may be more efficient for quantifying the magnitude of the macrophage response in the context of different experimental variables (e.g., therapeutic intervention or time post-injury/infection). The present study provides the first in-depth comparison of different techniques commonly used to quantify microglial/macrophage reactions in the pathological spinal cord. Individuals from the same and different laboratories applied techniques of digital image analysis (DIA), standard cell profile counting and a computer-assisted cell counting method with unbiased sampling to quantify macrophages in focal inflammatory lesions, disseminated lesions caused by autoimmune inflammation or at sites of spinal trauma. Our goal was to find a simple, rapid and sensitive method with minimal variability between trials and users. DIA was consistently the least variable and most time-efficient method for assessing the magnitude of macrophage responses across lesions and between users. When used to evaluate the efficacy of an anti-inflammatory treatment, DIA was 5-35 x faster than cell counting and was sensitive enough to detect group differences while eliminating inter-user variability. Since lesions are clearly defined and single profiles of microglia/macrophages are difficult to discern in most pathological specimens of brain or spinal cord, DIA offers significant advantages over other techniques for quantifying activated macrophages.

Indexed as

Analysis of VarianceAnimalsCalcium-Binding ProteinsCD11b AntigenCell CountDisease Models, AnimalDNA-Binding ProteinsEncephalomyelitis, Autoimmune, ExperimentalFemaleImage Processing, Computer-AssistedMacrophagesMiceMice, Inbred C57BLMicrofilament ProteinsMicrogliaReproducibility of ResultsAIF1 protein, humanCalcium-Binding ProteinsCD11b AntigenDNA-Binding ProteinsMicrofilament Proteins

Identifiers

PMID19393692
PMCPMC2737682
OpenAlexW2039242833

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.