Evidence map›Paper›PMID 19393163›Full record

ArticleMolecular and biochemical parasitology2009

Lipidomic analysis reveals that phosphatidylglycerol and phosphatidylethanolamine are newly generated phospholipids in an early-divergent protozoan, Giardia lamblia.

Mayte Yichoy, Ernesto S Nakayasu, Max Shpak, Clemente Aguilar, Stephen B Aley, Igor C Almeida, Siddhartha Das

Abstract read
In one paragraph

Article in Molecular and biochemical parasitology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Ultrastructural Alterations of the Human PathogenPathogens (Basel, Switzerland) · 2023
    Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Mayte YichoyDepartment of Biological Sciences, University of Texas at El Paso, El Paso, TX 79968-0519, USA.
Ernesto S Nakayasu
Max Shpak
Clemente Aguilar
Stephen B Aley
Igor C Almeida
Siddhartha Das
The University of Texas at El Paso · US

Funding

TOXICOLOGY PROJECTG12RR008124 · NCRR · UNIVERSITY OF TEXAS EL PASO · PI WALSH, ELIZABETH J · 1992 to 2011
$20.8M
UTEP SCORE InstrumentationS06GM008012 · NIGMS · UNIVERSITY OF TEXAS EL PASO · PI GARZA, KRISTINE M · 1989 to 2010
$15.8M
Sphingolipid and Mechanism of Cyst Formation by GiardiaR01AI095667 · NIAID · UNIVERSITY OF TEXAS EL PASO · PI DAS, SIDDHARTHA · 2011 to 2015
$2.1M
Molecular Composition and Function of Trypanosoma cruzi Shed VesiclesR01AI070655 · NIAID · UNIVERSITY OF TEXAS EL PASO · PI ALMEIDA, IGOR C · 2007 to 2011
$1.8M
NCRR NIH HHS 5G12RR008124NCRR NIH HHS G12 RR008124NIAID NIH HHS R01 AI070655NIAID NIH HHS R01 AI095667NIGMS NIH HHS S06 GM008012
6 · The paper itself

Abstract

The pathogenic protozoan Giardia lamblia is known to not synthesize membrane lipids de novo. Therefore, it is possible that lipids in the small intestine, where trophozoites colonize, play key roles in regulating the growth and differentiation of this important pathogen. The focus of the current study is to conduct a complete lipidomic analysis and to test the hypothesis that Giardia has some ability to generate new phospholipids (PLs). Using mass spectrometry, now we show that phosphatidylglycerols (PGs) are major PLs followed by phosphatidylcholines (PCs) and phosphatidylethanolamines (PEs) in non-encysting and encysting trophozoites, as well in cysts. The fatty acids attached to these PLs consist mostly of palmitate, palmitoleate, oleate, and linoleate. Results also indicate that PGs and PEs, unlike PCs, are not present in bovine bile and serum, the major sources of lipids of the culture medium, and that they could therefore be produced by fatty acid and headgroup remodeling reactions, circumventing the synthesis of entirely new PLs via de novo pathways. Genomic and transcriptional analyses show the presence of giardial phosphatidylglycerolphosphate synthase (gpgps) and phosphatidylserine decarboxylase (gpsd) genes, which are expressed throughout the life cycle. Bioinformatic and phylogenetic analyses further indicated that both genes are of prokaryotic origin and that they have undergone duplication in the course of evolution. Our studies suggest that the abundance of PG in Giardia is unique among eukaryotes and that its synthesis thus could serve as a potential target for developing new therapies against this waterborne parasite.

Indexed as

AnimalsFatty AcidsGas Chromatography-Mass SpectrometryGene Expression Regulation, EnzymologicGenome, ProtozoanGiardia lambliaMass SpectrometryPhosphatidylcholinesPhosphatidylethanolaminesPhosphatidylglycerolsPhospholipidsPhylogenyFatty AcidsPhosphatidylcholinesphosphatidylethanolaminePhosphatidylethanolaminesPhosphatidylglycerolsPhospholipids

Identifiers

PMID19393163
PMCPMC2737524
OpenAlexW1969213252

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.