Evidence map›Paper›PMID 19392240›Full record

ArticlePhysical review letters2009

Critical buckling length versus persistence length: what governs biofilament conformation?

Sirish Kaushik Lakkaraju, Wonmuk Hwang

Abstract read
In one paragraph

Article in Physical review letters, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Mechanical design of translocating motor proteins.Cell biochemistry and biophysics · 2009
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Sirish Kaushik LakkarajuDepartment of Biomedical Engineering, Texas A&M University College Station, Texas 77843, USA.
Wonmuk Hwang

Funding

Computational and Single-Molecule Characterization of Kinesin's Power StrokeR21NS058604 · NINDS · TEXAS ENGINEERING EXPERIMENT STATION · PI HWANG, WONMUK · 2007 to 2008
$355k
NINDS NIH HHS R21 NS058604NINDS NIH HHS R21NS058604
6 · The paper itself

Abstract

We numerically study the length dependence in the bending stiffness of alpha helices, coiled coils, and a linear chain model. As the length approaches what we named the critical buckling length lc, the chain appears to become increasingly more flexible. This is due to weak nonbonded attractions that eventually lead to buckling instability and alter the chain's conformational ensemble. For alpha helices and coiled coils, lc is much less than their respective persistence lengths, so lc is the defining length scale for their conformations. These results elucidate the importance of weak nonspecific attractions that are inherent in many biofilaments in physiological conditions.

Indexed as

PeptidesPolylysineProtein FoldingProtein Structure, SecondarySolutionsStructure-Activity RelationshipThermodynamicsVacuumPeptidespolyalaninepolyglycinepolyleucinePolylysineSolutions

Identifiers

PMID19392240
PMCPMC2749329

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.