Evidence map›Paper›PMID 19390642›Full record

ArticleMolecular vision2009

Release of 11-cis-retinal from cellular retinaldehyde-binding protein by acidic lipids.

John C Saari, Maria Nawrot, Ronald E Stenkamp, David C Teller, Gregory G Garwin

Open access · greenAbstract read
In one paragraph

Article in Molecular vision, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. The Amphipathic Helix in Visual Cycle Proteins: A Review.Advances in experimental medicine and biology · 2023
    Review
  5. The Role of Vitamin A in Retinal Diseases.International journal of molecular sciences · 2022
    Review
  6. The molecular aspects of absorption and metabolism of carotenoids and retinoids in vertebrates.Biochimica et biophysica acta. Molecular and cell biology of lipids · 2020
    Review
  7. Chloroplast Sec14-like 1 (CPSFL1) is essential for normal chloroplast development and affects carotenoid accumulation inProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  8. A Sec14 domain protein is required for photoautotrophic growth and chloroplast vesicle formation inProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  9. Review
  10. Review
  11. Structural biology of 11-The Biochemical journal · 2018
    Review
  12. Article
  13. Review
  14. Article
  15. CRALBP supports the mammalian retinal visual cycle and cone vision.The Journal of clinical investigation · 2015
    Article
  16. Article
  17. Identification of the 11-cis-specific retinyl-ester synthase in retinal Müller cells as multifunctional O-acyltransferase (MFAT).Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

John C SaariDepartment of Ophthalmology, University of Washington, School of Medicine, Seattle, WA 98195-6485, USA. jsaari@u.washington.edu
Maria Nawrot
Ronald E Stenkamp
David C Teller
Gregory G Garwin
University of Washington · US

Funding

Vision Research CoreP30EY001730 · NEI · UNIVERSITY OF WASHINGTON · PI MAUREEN E NEITZ · 1985 to 2026
$23.5M
BIOCHEMISTRY OF THE RETINA &PIGMENT EPITHELIUMR01EY002317 · NEI · UNIVERSITY OF WASHINGTON · PI SAARI, JOHN C · 1985 to 2007
$3.2M
NEI NIH HHS EY01730NEI NIH HHS EY02317NEI NIH HHS P30 EY001730NEI NIH HHS R01 EY002317
6 · The paper itself

Abstract

purposeTo determine molecular mechanisms for the release of 11-cis-retinal from the binding pocket of cellular retinaldehyde-binding protein (CRALBP).

methodsBinding of CRALBP to lipid surfaces was assessed with a lipid-immunoblot assay. Lipids were presented to CRALBP as small unilamellar vesicles (SUVs) consisting of phosphatidylcholine (PC) plus other lipids. Release of 9-cis-retinal or 11-cis-retinal from CRALBP was measured with spectral and high performance liquid chromatography (HPLC) assays based on the protection of the protein-bound retinal carbonyl group from reaction with NH(2)OH. The electrostatic surface potential of CRALBP was calculated from a model of its structure using the program CCP4mg.

resultsIncubation of CRALBP.11-cis-retinal with lipids absorbed on nitrocellulose revealed binding to the acidic lipids, phosphatidic acid (PA)>phosphatidylinositol 3,4,5-trisphosphate [PI(3,4,5)P(3)]>phosphatidylserine (PS)> PI(4,5)P(2) and little or no binding to PC, phosphatidylethanolamine (PE), or PI(4)P. 11-cis-retinal was released during incubation of CRALBP with SUVs consisting of PC plus 50 mol% PA but not during incubation with those composed of 100 mol% PC. The efficacy of release of 9-cis-retinal or 11-cis-retinal from CRALBP by phospholipid-containing SUVs generally paralleled that of the binding of CRALBP to the lipids (PA>PS>PI>>PC). Examination of the electrostatic surface potential of the protein structure revealed a basic recess on one face of the protein, which may bind acidic lipids.

conclusionsOur results identify the first physiologic substances that release 11-cis-retinal from CRALBP. PA and PS are relatively minor membrane lipids that can be generated in the cytoplasmic leaflet of the plasma membrane in response to various signal transduction pathways, where they could interact with cytosolic CRALBP. The mechanism for release of retinal from CRALBP by acidic lipids remains to be determined but could involve binding of the acidic lipid in the 11-cis-retinal binding site or to the positive basic recess on the protein surface. These results open a new facet in our understanding of how CRALBP functions in the regeneration of visual pigments.

Indexed as

AnimalsCarrier ProteinsCattleChromatography, High Pressure LiquidDiterpenesGlycerophospholipidsHydrogen-Ion ConcentrationImmunoblottingModels, MolecularProtein BindingProtein Interaction Domains and MotifsReproducibility of ResultsRetinaldehydeStatic Electricity11-cis-retinal-binding protein9-cis-retinalCarrier ProteinsDiterpenesGlycerophospholipidsRetinaldehyde

Identifiers

PMID19390642
PMCPMC2672148
OpenAlexW1842330439

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.