Evidence map›Paper›PMID 19389765›Full record

ArticleMicrobiology (Reading, England)2009

The OxyR homologue in Tannerella forsythia regulates expression of oxidative stress responses and biofilm formation.

Kiyonobu Honma, Elina Mishima, Satoru Inagaki, Ashu Sharma

Open access · greenAbstract read
In one paragraph

Article in Microbiology (Reading, England), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.6field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Functional Characterization of a Putative Sortase FA1364 inInternational journal of molecular sciences · 2026
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  3. Transcription regulator TrtA modulates oxygen stress response inApplied and environmental microbiology · 2025
    Article
  4. Article
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  6. FromMicroorganisms · 2021
    Review
  7. Insertional Inactivation ofMicroorganisms · 2021
    Article
  8. Review
  9. Review
  10. Article
  11. Characterization ofMicrobiology (Reading, England) · 2019
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Kiyonobu HonmaDepartment of Oral Biology, School of Dental Medicine, University at Buffalo, State University of New York, Buffalo, NY 14214-3092, USA.
Elina MishimaDepartment of Oral Biology, School of Dental Medicine, University at Buffalo, State University of New York, Buffalo, NY 14214-3092, USA.
Satoru InagakiDepartment of Microbiology, Tokyo Dental College, Chiba, Japan.
Ashu SharmaDepartment of Oral Biology, School of Dental Medicine, University at Buffalo, State University of New York, Buffalo, NY 14214-3092, USA.
University at Buffalo, State University of New York · USTokyo Dental College · JP

Funding

T. forsythia TLR2 ligands and surface glycans coordinate periodontal inflammationR01DE014749 · NIDCR · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI SHARMA, ASHU · 2003 to 2018
$4.9M
NIDCR NIH HHS DE014749NIDCR NIH HHS R01 DE014749
6 · The paper itself

Abstract

Tannerella forsythia is an anaerobic periodontal pathogen that encounters constant oxidative stress in the human oral cavity due to exposure to air and reactive oxidative species from coexisting dental plaque bacteria as well as leukocytes. In this study, we sought to characterize a T. forsythia ORF with close similarity to bacterial oxidative stress response sensor protein OxyR. To analyse the role of this OxyR homologue, a gene deletion mutant was constructed and characterized. Aerotolerance, survival after hydrogen peroxide challenge and transcription levels of known bacterial antioxidant genes were then determined. Since an association between oxidative stress and biofilm formation has been observed in bacterial systems, we also investigated the role of the OxyR protein in biofilm development by T. forsythia. Our results showed that aerotolerance, sensitivity to peroxide challenge and the expression of oxidative stress response genes were significantly reduced in the mutant as compared with the wild-type strain. Moreover, the results of biofilm analyses showed that, as compared with the wild-type strain, the oxyR mutant showed significantly less autoaggregation and a reduced ability to form mixed biofilms with Fusobacterium nucleatum. In conclusion, a gene annotated in the T. forsythia genome as an oxyR homologue was characterized. Our studies showed that the oxyR homologue in T. forsythia constitutively activates antioxidant genes involved in resistance to peroxides as well as oxygen stress (aerotolerance). In addition, the oxyR deletion attenuates biofilm formation in T. forsythia.

Indexed as

BiofilmsOxidative StressAdaptation, PhysiologicalBacterial AdhesionBacterial ProteinsBacteroidaceae InfectionsDNA-Binding ProteinsGene Expression Regulation, BacterialGenes, BacterialGenetic Complementation TestHumansHydrogen PeroxidePorphyromonasPromoter Regions, GeneticSequence HomologyBacterial ProteinsDNA-Binding ProteinsDPS protein, BacteriaHydrogen Peroxide

Identifiers

PMID19389765
PMCPMC2782426
OpenAlexW2038934814

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.