Evidence map›Paper›PMID 19387492›Full record

ArticleThe EMBO journal2009

Yeast Uri1p promotes translation initiation and may provide a link to cotranslational quality control.

Anna Deplazes, Natalie Möckli, Brian Luke, Daniel Auerbach, Matthias Peter

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 42 citations in OpenAlex.

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  19. New insights into the biogenesis of nuclear RNA polymerases?Biochemistry and cell biology = Biochimie et biologie cellulaire · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Anna DeplazesDepartment of Biology, Institute of Biochemistry, ETH Zurich, Zurich, Switzerland. anna.deplazes@bc.biol.ethz.ch or
Natalie Möckli
Brian Luke
Daniel Auerbach
Matthias Peter
Biotechnology Institute Thurgau · CHETH Zurich · CHInstitute for Biomedical Engineering · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Translation initiation in eukaryotes is accomplished by a large set of translation initiation factors, some of which are regulated by signals monitoring intracellular and environmental conditions. Here, we show that Uri1p is required for efficient translation initiation in budding yeast. Indeed, uri1Delta cells are slow growing, sensitive to translation inhibitors and they exhibit an increased 80S peak in polysome profiles. Moreover, GCN4 translation is derepressed in uri1Delta cells, strongly supporting an initiation defect. Genetic and biochemical experiments indicate that Uri1p interacts with the translation initiation factor eIF1A and promotes ternary complex (TC) recruitment to the 40S subunit. Interestingly, we found that Uri1p is also part of a chaperone-network, including the prefoldin Pfd6p and several other proteins involved in cotranslational quality control such as the ribosome-associated Hsp70 chaperone Ssb1p, the Hsp40 Sis1p and the translation elongation factor eEF1A. Together with genetic data, these interactions indicate that Uri1p may coordinate translation initiation and cotranslational quality control.

Indexed as

Protein BiosynthesisProtein Interaction MappingBasic-Leucine Zipper Transcription FactorsDNA-Binding ProteinsEukaryotic Initiation Factor-1Gene DeletionHeat-Shock ProteinsHSP40 Heat-Shock ProteinsHSP70 Heat-Shock ProteinsPeptide Initiation FactorsProtein BindingSaccharomycesSaccharomyces cerevisiae ProteinsTranscription FactorsBasic-Leucine Zipper Transcription FactorsDNA-Binding ProteinsEukaryotic Initiation Factor-1eukaryotic peptide initiation factor-1AGCN4 protein, S cerevisiaeHeat-Shock ProteinsHSP40 Heat-Shock ProteinsHSP70 Heat-Shock ProteinsPeptide Initiation FactorsSaccharomyces cerevisiae ProteinsSIS1 protein, S cerevisiaeSSA3 protein, S cerevisiaeSSB1 protein, S cerevisiaeTranscription FactorsUri1 protein, S cerevisiae

Identifiers

PMID19387492
PMCPMC2688542
OpenAlexW2088235264

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.