Evidence map›Paper›PMID 19387438›Full record

ArticleNature2009

NAADP mobilizes calcium from acidic organelles through two-pore channels.

Peter J Calcraft, Margarida Ruas, Zui Pan, Xiaotong Cheng, Abdelilah Arredouani, Xuemei Hao, Jisen Tang, Katja Rietdorf, Lydia Teboul, Kai-Ting Chuang and 11 more

Open access · greenAbstract read
In one paragraph

Article in Nature, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 455 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
455citing papers in PubMed, 1 pooled it
41.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

455 citing papers in PubMed, 1 synthesis or guideline pooled it, 743 citations in OpenAlex.

  1. The protein interaction networks of mucolipins and two-pore channels.Biochimica et biophysica acta. Molecular cell research · 2019
    Pooled it
  2. Review
  3. Article
  4. Allosteric switching of CaThe EMBO journal · 2026
    Article
  5. Article
  6. Endosomal TPC1-mediated CaProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Voltage-gated proton channel Hv1/VSOP regulates reciprocal interactions between F-actin and endosomes in microglia.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article

395 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 6 institutions in 3 countries.

Peter J CalcraftCentre for Integrative Physiology, College of Medicine and Veterinary Medicine, University of Edinburgh, Hugh Robson Building, Edinburgh EH8 9XD, Scotland, UK.
Margarida Ruas
Zui Pan
Xiaotong Cheng
Abdelilah Arredouani
Xuemei Hao
Jisen Tang
Katja Rietdorf
Lydia Teboul
Kai-Ting Chuang
Peihui Lin
Rui Xiao
Chunbo Wang
Yingmin Zhu
Yakang Lin
Christopher N Wyatt
John Parrington
Jianjie Ma
A Mark Evans
Antony Galione
Michael X Zhu
University of Oxford · GBThe Ohio State University · USJohnson University · USUniversity of Edinburgh · GBMary Lyon Centre at MRC Harwell · GBPeking University · CN

Funding

Ohio State Neuroscience Centr CoreP30NS045758 · NINDS · OHIO STATE UNIVERSITY · PI OBRIETAN, KARL H · 2004 to 2015
$7.7M
Molecular mechanism of regulation of mI(CAT) in intestinal smooth muscle cellsR01DK081654 · NIDDK · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI ZHU, MICHAEL X · 2009 to 2012
$1.2M
MECHANISM OF CONFORMATIONAL COUPLINGR01NS042183 · NINDS · OHIO STATE UNIVERSITY · PI ZHU, MICHAEL X · 2001 to 2004
$1.1M
High throughput screening of ligands of TRP channelsR21NS056942 · NINDS · OHIO STATE UNIVERSITY · PI ZHU, MICHAEL X · 2006 to 2008
$261k
British Heart Foundation FS/05/050Medical Research Council MC_UP_1502/1NIDDK NIH HHS R01 DK081654NINDS NIH HHS P30 NS045758NINDS NIH HHS P30-NS045758NINDS NIH HHS R01 NS042183NINDS NIH HHS R21 NS056942Wellcome TrustWellcome Trust 070772
6 · The paper itself

Abstract

Ca(2+) mobilization from intracellular stores represents an important cell signalling process that is regulated, in mammalian cells, by inositol-1,4,5-trisphosphate (InsP(3)), cyclic ADP ribose and nicotinic acid adenine dinucleotide phosphate (NAADP). InsP(3) and cyclic ADP ribose cause the release of Ca(2+) from sarcoplasmic/endoplasmic reticulum stores by the activation of InsP(3) and ryanodine receptors (InsP(3)Rs and RyRs). In contrast, the nature of the intracellular stores targeted by NAADP and the molecular identity of the NAADP receptors remain controversial, although evidence indicates that NAADP mobilizes Ca(2+) from lysosome-related acidic compartments. Here we show that two-pore channels (TPCs) comprise a family of NAADP receptors, with human TPC1 (also known as TPCN1) and chicken TPC3 (TPCN3) being expressed on endosomal membranes, and human TPC2 (TPCN2) on lysosomal membranes when expressed in HEK293 cells. Membranes enriched with TPC2 show high affinity NAADP binding, and TPC2 underpins NAADP-induced Ca(2+) release from lysosome-related stores that is subsequently amplified by Ca(2+)-induced Ca(2+) release by InsP(3)Rs. Responses to NAADP were abolished by disrupting the lysosomal proton gradient and by ablating TPC2 expression, but were only attenuated by depleting endoplasmic reticulum Ca(2+) stores or by blocking InsP(3)Rs. Thus, TPCs form NAADP receptors that release Ca(2+) from acidic organelles, which can trigger further Ca(2+) signals via sarcoplasmic/endoplasmic reticulum. TPCs therefore provide new insights into the regulation and organization of Ca(2+) signals in animal cells, and will advance our understanding of the physiological role of NAADP.

Indexed as

Calcium SignalingAnimalsCalciumCalcium ChannelsCell LineChickensHumansHydrogen-Ion ConcentrationInsulin-Secreting CellsMiceMice, KnockoutMolecular Sequence DataNADPOrganellesProtein BindingTwo-Pore ChannelsCalciumCalcium ChannelsNAADPNADPTPCN1 protein, humanTPCN2 protein, humanTwo-Pore Channels

Identifiers

PMID19387438
PMCPMC2761823
OpenAlexW2031790758

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.