Evidence map›Paper›PMID 19387067›Full record

ArticleInvestigative ophthalmology & visual science2009

Stromal edema in klf4 conditional null mouse cornea is associated with altered collagen fibril organization and reduced proteoglycans.

Robert D Young, Shivalingappa K Swamynathan, Craig Boote, Mary Mann, Andrew J Quantock, Joram Piatigorsky, James L Funderburgh, Keith M Meek

Abstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 21 citations in OpenAlex.

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  12. Ocular surface development and gene expression.Journal of ophthalmology · 2013
    Article
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  15. Review
  16. Article
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  19. Corneal epithelial development and homeostasis.Differentiation; research in biological diversity
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Robert D YoungStructural Biophysics Group, School of Optometry and Vision Sciences, Cardiff University, Cardiff, Wales, United Kingdom.
Shivalingappa K Swamynathan
Craig Boote
Mary Mann
Andrew J Quantock
Joram Piatigorsky
James L Funderburgh
Keith M Meek
Cardiff University · GBEye and Ear Foundation · USUniversity of Pittsburgh · US

Funding

Virus Production and Manipulation of Protein/Gene Expression ModuleP30EY008098 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI John D Ash · 1989 to 2026
$17.8M
PROTEOGLYCANS IN NORMAL AND SCARRED CORNEASR01EY009368 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI FUNDERBURGH, JAMES L · 1993 to 2012
$3.8M
Role of KLF4 and KLF5 in mouse cornea developmentK22EY016875 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SWAMYNATHAN, SHIVALINGAPPA KOTTUR · 2009 to 2010
$438k
Intramural NIH HHSMedical Research Council G0001033Medical Research Council G0600755NEI NIH HHS 1K22EY016875-01NEI NIH HHS 5P30 EY08098-19NEI NIH HHS EY09368NEI NIH HHS K22 EY016875NEI NIH HHS R01 EY009368
6 · The paper itself

Abstract

purposeKlf4, one of the highly expressed transcription factors in the mouse cornea, plays an important role in maturation and maintenance of the ocular surface. In this study, the structure and proteoglycan composition of the Klf4 conditional null (Klf4CN) corneal stroma was investigated, to further characterize the previously reported Klf4CN stromal edema.

methodsCollagen fibril spacing and diameter were calculated from scattering intensity profiles from small angle synchrotron x-ray scattering patterns obtained across the cornea along a vertical meridian at 0.5-mm intervals. Collagen fibril organization and proteoglycans were visualized by electron microscopy (EM), with or without the cationic dye cuprolinic blue. Proteoglycans and glycosaminoglycans were further analyzed by fluorophore-assisted carbohydrate electrophoresis (FACE) and immunoblot analysis. Q-RT-PCR was used to measure the transcript levels.

resultsIn the central cornea, the average collagen interfibrillar Bragg spacing increased from 44.5 nm (SD +/-1.8) in wild-type to 66.5 nm (SD +/-2.3) in Klf4CN, as measured by x-ray scattering and confirmed by EM. Mean collagen fibril diameter increased from 32 nm (SD +/-0.4) in wild-type to 42.3 nm (SD +/-4.8) in Klf4CN corneal stroma. Downregulation of proteoglycans detected by EM in the Klf4CN stroma was confirmed by FACE and immunoblot analysis. Q-RT-PCR showed that, whereas the Klf4CN corneal proteoglycan transcript levels remained unchanged, matrix metalloproteinase (MMP) transcript levels were significantly upregulated.

conclusionsThe Klf4CN corneal stromal edema is characterized by increased collagen interfibrillar spacing and increased diameter of individual fibrils. The stroma also exhibits reduced interfibrillar proteoglycans throughout, which is possibly caused by increased expression of MMPs.

Indexed as

AnimalsCollagenCorneal EdemaCorneal StromaDown-RegulationGene DeletionGene Expression RegulationImmunoblottingKruppel-Like Factor 4Kruppel-Like Transcription FactorsMiceMicroscopy, ElectronProteoglycansReverse Transcriptase Polymerase Chain ReactionX-Ray DiffractionZinc FingersCollagenKlf4 protein, mouseKruppel-Like Factor 4Kruppel-Like Transcription FactorsProteoglycans

Identifiers

PMID19387067
PMCPMC2761629
OpenAlexW2119534483

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.