Evidence map›Paper›PMID 19386707›Full record

ArticleJournal of virology2009

Infection of HLA-DR1 transgenic mice with a human isolate of influenza a virus (H1N1) primes a diverse CD4 T-cell repertoire that includes CD4 T cells with heterosubtypic cross-reactivity to avian (H5N1) influenza virus.

Katherine A Richards, Francisco A Chaves, Andrea J Sant

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 65 citations in OpenAlex.

  1. Trial
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  8. Immunity to Influenza Infection in Humans.Cold Spring Harbor perspectives in medicine · 2021
    Review
  9. Article
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  13. Protein Vaccination Directs the CD4Journal of virology · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Katherine A RichardsDavid H. Smith Center for Vaccine Biology and Immunology, Aab Institute of Biomedical Sciences, Department of Microbiology and Immunology, University of Rochester, Rochester, NY 14642, USA.
Francisco A Chaves
Andrea J Sant
University of Rochester · US

Funding

Immunodominance in CD4 T Cell ResponsesR01AI051542 · NIAID · UNIVERSITY OF ROCHESTER · PI SANT, ANDREA JANINE · 2002 to 2012
$3.6M
Manipulation of immunodominance to promote heterosubtypic immunity to InfluenzaR21AI069372 · NIAID · UNIVERSITY OF ROCHESTER · PI SANT, ANDREA JANINE · 2006 to 2007
$423k
NIAID NIH HHS 5R21AI69372NIAID NIH HHS HHSN266200700008CNIAID NIH HHS R01 AI051542-0641NIAID NIH HHS R21 AI069372
6 · The paper itself

Abstract

The specificity of the CD4 T-cell immune response to influenza virus is influenced by the genetic complexity of the virus and periodic encounters with variant subtypes and strains. In order to understand what controls CD4 T-cell reactivity to influenza virus proteins and how the influenza virus-specific memory compartment is shaped over time, it is first necessary to understand the diversity of the primary CD4 T-cell response. In the study reported here, we have used an unbiased approach to evaluate the peptide specificity of CD4 T cells elicited after live influenza virus infection. We have focused on four viral proteins that have distinct intracellular distributions in infected cells, hemagglutinin (HA), neuraminidase (NA), nucleoprotein, and the NS1 protein, which is expressed in infected cells but excluded from virion particles. Our studies revealed an extensive diversity of influenza virus-specific CD4 T cells that includes T cells for each viral protein and for the unexpected immunogenicity of the NS1 protein. Due to the recent concern about pandemic avian influenza virus and because CD4 T cells specific for HA and NA may be particularly useful for promoting the production of neutralizing antibody to influenza virus, we have also evaluated the ability of HA- and NA-specific CD4 T cells elicited by a circulating H1N1 strain to cross-react with related sequences found in an avian H5N1 virus and find substantial cross-reactivity, suggesting that seasonal vaccines may help promote protection against avian influenza virus.

Indexed as

Amino Acid SequenceAnimalsAntigens, ViralCD4-Positive T-LymphocytesCell LineCross ReactionsEpitopes, T-LymphocyteHLA-DR1 AntigenHumansInfluenza A Virus, H1N1 SubtypeInfluenza A Virus, H5N1 SubtypeMiceMice, TransgenicMolecular Sequence DataOrthomyxoviridae InfectionsSequence AlignmentAntigens, ViralEpitopes, T-LymphocyteHLA-DR1 AntigenINS1 protein, influenza virusViral Nonstructural Proteins

Identifiers

PMID19386707
PMCPMC2698557
OpenAlexW2023251537

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.