Evidence map›Paper›PMID 19384292›Full record

ArticleMolecular therapy : the journal of the American Society of Gene Therapy2009

Mechanism of reduction in titers from lentivirus vectors carrying large inserts in the 3'LTR.

Fabrizia Urbinati, Paritha Arumugam, Tomoyasu Higashimoto, Anil Perumbeti, Kyle Mitts, Ping Xia, Punam Malik

Open access · bronzeAbstract read
In one paragraph

Article in Molecular therapy : the journal of the American Society of Gene Therapy, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 67 citations in OpenAlex.

  1. Trial
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  8. Review
  9. CRISPR-Based Tools for Fighting Rare Diseases.Life (Basel, Switzerland) · 2022
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  14. The Promise and the Hope of Gene Therapy.Frontiers in genome editing · 2021
    Review
  15. Article
  16. Gene Therapy For Beta-Thalassemia: Updated Perspectives.The application of clinical genetics · 2019
    Article
  17. Article
  18. Article
  19. Review
  20. Insulated Foamy Viral Vectors.Human gene therapy · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Fabrizia UrbinatiDivision of Experimental Hematology and Cancer Biology, Cincinnati Children's Hospital Medical Center, University of Cincinnati, Cincinnati, Ohio 45229-3039, USA.
Paritha Arumugam
Tomoyasu Higashimoto
Anil Perumbeti
Kyle Mitts
Ping Xia
Punam Malik
Cincinnati Children's Hospital Medical Center · USUniversity of Cincinnati · US

Funding

Transduction of Human Stem and Progenitor CellsP01HL073104 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KOHN, DONALD B · 2003 to 2013
$18.3M
ROLE OF ENDOTHELIN-1 INSICKLEACUTE CHEST SYNDROMEU54HL070595 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MALIK, PUNAM · 2003 to 2007
$8.3M
Lentiviral vectors for gene therapy for beta-thalassemiaR01HL070135 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI MALIK, PUNAM · 2002 to 2006
$1.5M
A preclinical large animal model for globin gene transferZ01HL006008 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI TISDALE, JOHN · 2008 to 2008
$330k
Intramural NIH HHS Z01 HL006008NHLBI NIH HHS P01 HL073104NHLBI NIH HHS P01-HL073104NHLBI NIH HHS R01 HL070135NHLBI NIH HHS R01-HL70135NHLBI NIH HHS U54 HL06-008NHLBI NIH HHS U54 HL070595NHLBI NIH HHS U54-HL070595
6 · The paper itself

Abstract

Self-inactivating (SIN) lentiviruses flanked by the 1.2-kb chicken hypersensitive site-4 (cHS4) insulator element provide consistent, improved expression of transgenes, but have significantly lower titers. The mechanism by which this occurs is unknown. Lengthening the lentiviral (LV) vector transgene cassette by an additional 1.2 kb by an internal cassette caused no further reduction in titers. However, when cHS4 sequences or inert DNA spacers of increasing size were placed in the 3'-long terminal repeat (LTR), infectious titers decreased proportional to the length of the insert. The stage of vector life cycle affected by vectors carrying the large cHS4 3'LTR insert was compared to a control vector: there was no increase in read-through transcription with insertion of the 1.2-kb cHS4 in the 3'LTR. Equal amount of full-length viral mRNA was produced in packaging cells and viral assembly/packaging was unaffected, resulting in comparable amounts of intact vector particles produced by either vectors. However, LV vectors carrying cHS4 in the 3'LTR were inefficiently processed following target-cell entry, with reduced reverse transcription and integration efficiency, and hence lower transduction titers. Therefore, vectors with large insertions in the 3'LTR are transcribed and packaged efficiently, but the LTR insert hinders viral-RNA (vRNA) processing and transduction of target cells. These studies have important implications in design of integrating vectors.

Indexed as

beta-GlobinsBlotting, NorthernBlotting, SouthernCell LineGenetic TherapyGenetic VectorsHumansLentivirusPolymerase Chain ReactionTerminal Repeat SequencesTransduction, Geneticbeta-Globins

Identifiers

PMID19384292
PMCPMC2835256
OpenAlexW2081288756

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.