Evidence map›Paper›PMID 19383305›Full record

ArticleMolecular oncology2007

Use of high density antibody arrays to validate and discover cancer serum biomarkers.

Christian M Loch, Arturo B Ramirez, Yan Liu, Cassandra L Sather, Jeffrey J Delrow, Nathalie Scholler, Barbara M Garvik, Nicole D Urban, Martin W McIntosh, Paul D Lampe

Abstract read
In one paragraph

Article in Molecular oncology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Trial
  2. Trial
  3. Trial
  4. Article
  5. Article
  6. Tumor-derived Autoantibodies Identify Malignant Pulmonary Nodules.American journal of respiratory and critical care medicine · 2019
    Article
  7. Article
  8. Observational
  9. MAPRE1 as a plasma biomarker for early-stage colorectal cancer and adenomas.Cancer prevention research (Philadelphia, Pa.) · 2015
    Article
  10. Observational
  11. Cross-species antibody microarray interrogation identifies a 3-protein panel of plasma biomarkers for early diagnosis of pancreas cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2015
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Christian M LochMolecular Diagnostics Program, Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, WA 98109-1024, USA.
Arturo B Ramirez
Yan Liu
Cassandra L Sather
Jeffrey J Delrow
Nathalie Scholler
Barbara M Garvik
Nicole D Urban
Martin W McIntosh
Paul D Lampe

Funding

Vaccinating against IGFBP-2 to prevent ovarian cancer relapseP50CA083636 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI DRESCHER, CHARLES, URBAN, NICOLE DENISE · 1999 to 2015
$35.1M
Affinity-based Seurm Proteomics: Breast/Ovarian CancerU01CA111273 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI MCINTOSH, MARTIN · 2005 to 2009
$3.2M
NCI NIH HHS P50 CA083636NCI NIH HHS P50 CA 83636NCI NIH HHS U01 CA111273
6 · The paper itself

Abstract

Perhaps the greatest barrier to translation of serum biomarker discoveries is the inability to evaluate putative biomarkers in high throughput validation studies. Here we report on the development, production, and implementation of a high-density antibody microarray used to evaluate large numbers of candidate ovarian cancer serum biomarkers. The platform was shown to be useful for evaluation of individual antibodies for comparative analysis, such as with disease classification, and biomarker validation and discovery. We demonstrate its performance by showing that known tumor markers behave as expected. We also identify several promising biomarkers from a candidate list and generate hypotheses to support new discovery studies.

Indexed as

AgedAged, 80 and overAntibodiesBiomarkers, TumorCase-Control StudiesFemaleHumansMiddle AgedOligonucleotide Array Sequence AnalysisOvarian NeoplasmsReproducibility of ResultsAntibodiesBiomarkers, Tumor

Identifiers

PMID19383305
PMCPMC2671017

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.