Evidence map›Paper›PMID 19380626›Full record

ArticleCirculation2009

A functional single-nucleotide polymorphism in the TRPC6 gene promoter associated with idiopathic pulmonary arterial hypertension.

Ying Yu, Steve H Keller, Carmelle V Remillard, Olga Safrina, Ann Nicholson, Shenyuan L Zhang, Weihua Jiang, Nivruthi Vangala, Judd W Landsberg, Jian-Ying Wang and 10 more

Open access · greenAbstract read
In one paragraph

Article in Circulation, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 108 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
108citing papers in PubMed, 1 pooled it
10.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

108 citing papers in PubMed, 1 synthesis or guideline pooled it, 189 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Impact of C-Terminal PKC Phosphorylation on TRPC6 Current Kinetics.International journal of molecular sciences · 2025
    Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Review
  11. Review
  12. Review
  13. Review
  14. Article
  15. Article
  16. Mechanosensitive channel Piezo1 is required for pulmonary artery smooth muscle cell proliferation.American journal of physiology. Lung cellular and molecular physiology · 2022
    Article
  17. Review
  18. Review
  19. Article
  20. TRPC6, a therapeutic target for pulmonary hypertension.American journal of physiology. Lung cellular and molecular physiology · 2021
    Article

48 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors at 3 institutions in 1 country.

Ying YuDepartment of Medicine, University of California, San Diego, La Jolla, CA 92093-0725, USA. Ying.Yu@AlconLabs.com
Steve H Keller
Carmelle V Remillard
Olga Safrina
Ann Nicholson
Shenyuan L Zhang
Weihua Jiang
Nivruthi Vangala
Judd W Landsberg
Jian-Ying Wang
Patricia A Thistlethwaite
Richard N Channick
Ivan M Robbins
James E Loyd
Hossein A Ghofrani
Friedrich Grimminger
Ralph T Schermuly
Michael D Cahalan
Lewis J Rubin
Jason X-J Yuan
University of California, Irvine · USUniversity of Maryland, Baltimore · USVanderbilt University · US

Funding

Molecular Mechanisms of lon Channels in T LymphocytesR01NS014609 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI CAHALAN, MICHAEL D · 1985 to 2022
$7.0M
Capacitative Ca2+ Entry in Pulmonary Myocyte GrowthR01HL066012 · NHLBI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI YUAN, JASON X J · 2002 to 2016
$5.2M
Molecular Mechanisms of Ion Channels in T LymphocytesR37NS014609 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI CAHALAN, MICHAEL D · 2006 to 2012
$3.3M
ION CHANNELS AND PULMONARY VASCULAR TONER01HL054043 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI YUAN, JASON X J · 2000 to 2008
$2.7M
CELLULAR MECHANISMS OF PPH--ROLE OF POTASSIUM CHANNELSR01HL064945 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI YUAN, JASON X.-J. · 1999 to 2006
$2.5M
Molecular Mechanisms of lon Channels in T LymphocytesR56NS014609 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI CAHALAN, MICHAEL D · 2018 to 2018
$514k
ION CHANNELS AND PULMONARY VASCULAR TONER29HL054043 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI YUAN, JASON X.-J. · 1995 to 1999
–
NHLBI NIH HHS HL54043NHLBI NIH HHS HL64945NHLBI NIH HHS HL66012NHLBI NIH HHS R01 HL054043NHLBI NIH HHS R01 HL064945NHLBI NIH HHS R01 HL066012NHLBI NIH HHS R29 HL054043NINDS NIH HHS NS14609NINDS NIH HHS R01 NS014609NINDS NIH HHS R37 NS014609NINDS NIH HHS R56 NS014609
6 · The paper itself

Abstract

backgroundExcessive proliferation of pulmonary artery smooth muscle cells (PASMCs) plays an important role in the development of idiopathic pulmonary arterial hypertension (IPAH), whereas a rise in cytosolic Ca2+ concentration triggers PASMC contraction and stimulates PASMC proliferation. Recently, we demonstrated that upregulation of the TRPC6 channel contributes to proliferation of PASMCs isolated from IPAH patients. This study sought to identify single-nucleotide polymorphisms (SNPs) in the TRPC6 gene promoter that are associated with IPAH and have functional significance in regulating TRPC6 activity in PASMCs. METHODS AND

resultsGenomic DNA was isolated from blood samples of 237 normal subjects and 268 IPAH patients. Three biallelic SNPs, -361 (A/T), -254(C/G), and -218 (C/T), were identified in the 2000-bp sequence upstream of the transcriptional start site of TRPC6. Although the allele frequencies of the -361 and -218 SNPs were not different between the groups, the allele frequency of the -254(C-->G) SNP in IPAH patients (12%) was significantly higher than in normal subjects (6%; P<0.01). Genotype data showed that the percentage of -254G/G homozygotes in IPAH patients was 2.85 times that of normal subjects. Moreover, the -254(C-->G) SNP creates a binding sequence for nuclear factor-kappaB. Functional analyses revealed that the -254(C-->G) SNP enhanced nuclear factor-kappaB-mediated promoter activity and stimulated TRPC6 expression in PASMCs. Inhibition of nuclear factor-kappaB activity attenuated TRPC6 expression and decreased agonist-activated Ca2+ influx in PASMCs of IPAH patients harboring the -254G allele.

conclusionsThese results suggest that the -254(C-->G) SNP may predispose individuals to an increased risk of IPAH by linking abnormal TRPC6 transcription to nuclear factor-kappaB, an inflammatory transcription factor.

Indexed as

Polymorphism, Single NucleotidePromoter Regions, GeneticBinding SitesCase-Control StudiesCell ProliferationGene FrequencyGenetic Predisposition to DiseaseGenotypeHumansHypertensionMuscle, Smooth, VascularMyocytes, Smooth MuscleNF-kappa BPulmonary ArteryTRPC6 Cation ChannelTRPC Cation ChannelsNF-kappa BTRPC6 Cation ChannelTRPC6 protein, humanTRPC Cation Channels

Identifiers

PMID19380626
PMCPMC2749566
OpenAlexW2161603584

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.