Evidence map›Paper›PMID 19380488›Full record

ArticleMolecular and cellular biology2009

Locally, meiotic double-strand breaks targeted by Gal4BD-Spo11 occur at discrete sites with a sequence preference.

Hajime Murakami, Alain Nicolas

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Article
  3. Reconstitution of SPO11-dependent double-strand break formation.bioRxiv : the preprint server for biology · 2024
    Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Mechanism and Control of Meiotic DNA Double-Strand Break Formation inFrontiers in cell and developmental biology · 2021
    Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Meiotic DSB patterning: A multifaceted process.Cell cycle (Georgetown, Tex.) · 2016
    Review
  16. Article
  17. Article
  18. Meiosis: making a break for it.Current opinion in cell biology · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Hajime MurakamiRecombination and Genetic Instability, Institut Curie Centre de Recherche, UMR3244 CNRS, Université Pierre et Marie Curie, 26 Rue d'Ulm, 75248 Paris Cedex 05, France.
Alain Nicolas
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Meiotic recombination is initiated by DNA double-strand breaks (DSBs) that are catalyzed by the type II topoisomerase-like Spo11 protein. Locally, at recombination hot spots, Spo11 introduces DSBs at multiple positions within approximately 75 to 250 bp, corresponding to accessible regions of the chromatin. The molecular basis of this multiplicity of cleavage positions, observed in a population of meiotic cells, remains elusive. To address this issue, we have examined the properties of the Gal4BD-Spo11 fusion protein, which targets meiotic DSBs to regions with Gal4 binding sites (UAS). By single-nucleotide resolution mapping of targeted DSBs, we found that DSB formation was restricted to discrete sites approximately 20 nucleotides from the UAS, defining a "DSB targeting window." Thus, the multiplicity of cleavage positions at natural Spo11 hot spots likely represents binding of Spo11 to different distinct sites within the accessible DNA region in each different meiotic cell. Further, we showed that mutations in the Spo11 moiety affected the DSB distribution in the DSB targeting window and that mutations in the DNA at the Spo11 cleavage site affected DSB position. These results demonstrate that Spo11 itself has sequence preference and contributes to the choice of DSB positions.

Indexed as

Base SequenceDNA Breaks, Double-StrandedChromosome MappingDNA-Binding ProteinsDNA RepairDNA Topoisomerases, Type IIEndodeoxyribonucleasesMeiosisMeiotic Recombination Protein SPO11Models, MolecularMolecular Sequence DataMutationProtein ConformationRecombinant Fusion ProteinsRecombination, GeneticSaccharomyces cerevisiaeDNA-Binding ProteinsDNA Topoisomerases, Type IIEndodeoxyribonucleasesGAL4 protein, S cerevisiaeMeiotic Recombination Protein SPO11Recombinant Fusion ProteinsSaccharomyces cerevisiae ProteinsSpo11 protein, S cerevisiaeTranscription Factors

Identifiers

PMID19380488
PMCPMC2698773
OpenAlexW2117034592

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.