Evidence map›Paper›PMID 19380479›Full record

ArticleGenetics2009

Drosophila ISWI regulates the association of histone H1 with interphase chromosomes in vivo.

Giorgia Siriaco, Renate Deuring, Mariacristina Chioda, Peter B Becker, John W Tamkun

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 39 citations in OpenAlex.

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  7. Dosage compensation in Drosophila.Cold Spring Harbor perspectives in biology · 2015
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Giorgia SiriacoAdolf-Butenandt-Institute, Molecular Biology, Munich Center of Integrated Protein Science, Ludwig-Maximilians-University, 80336 Munich, Germany.
Renate Deuring
Mariacristina Chioda
Peter B Becker
John W Tamkun
University of California, Santa Cruz · USCenter for Integrated Protein Science Munich · DE

Funding

Studies of Chromatin Remodeling FactorsR01GM049883 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI TAMKUN, JOHN W. · 1993 to 2013
$3.9M
NIGMS NIH HHS GM49883NIGMS NIH HHS R01 GM049883
6 · The paper itself

Abstract

Although tremendous progress has been made toward identifying factors that regulate nucleosome structure and positioning, the mechanisms that regulate higher-order chromatin structure remain poorly understood. Recent studies suggest that the ISWI chromatin-remodeling factor plays a key role in this process by promoting the assembly of chromatin containing histone H1. To test this hypothesis, we investigated the function of H1 in Drosophila. The association of H1 with salivary gland polytene chromosomes is regulated by a dynamic, ATP-dependent process. Reducing cellular ATP levels triggers the dissociation of H1 from polytene chromosomes and causes chromosome defects similar to those resulting from the loss of ISWI function. H1 knockdown causes even more severe defects in chromosome structure and a reduction in nucleosome repeat length, presumably due to the failure to incorporate H1 during replication-dependent chromatin assembly. Our findings suggest that ISWI regulates higher-order chromatin structure by modulating the interaction of H1 with interphase chromosomes.

Indexed as

Adenosine TriphosphatasesAdenosine TriphosphateAnimalsAnimals, Genetically ModifiedBlotting, WesternChromatinChromatin Assembly and DisassemblyChromosomesDNA ReplicationDrosophila melanogasterDrosophila ProteinsFemaleFluorescence Recovery After PhotobleachingHistonesInterphaseLuminescent ProteinsAdenosine TriphosphatasesAdenosine TriphosphateChromatinDrosophila ProteinsHistonesISWI proteinLuminescent ProteinsNucleosomesRNA, Small InterferingTranscription Factors

Identifiers

PMID19380479
PMCPMC2710149
OpenAlexW1968685605

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.