Evidence map›Paper›PMID 19379516›Full record

ArticleArthritis research & therapy2009

Differential gene expression in the salivary gland during development and onset of xerostomia in Sjögren's syndrome-like disease of the C57BL/6.NOD-Aec1Aec2 mouse.

Cuong Q Nguyen, Ashok Sharma, Byung Ha Lee, Jin-Xiong She, Richard A McIndoe, Ammon B Peck

Open access · goldAbstract read
In one paragraph

Article in Arthritis research & therapy, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Lessons from Animal Models in Sjögren's Syndrome.International journal of molecular sciences · 2023
    Review
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  8. Blocking IAgLife sciences · 2022
    Article
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  11. Review
  12. Review
  13. Article
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  16. Article
  17. Innate immunity in Sjögren's syndrome.Clinical immunology (Orlando, Fla.) · 2017
    Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Cuong Q NguyenDepartment of Oral Biology, College of Dentistry, University of Florida, Gainesville, FL 32610, USA. Nguyen@pathology.ufl.edu
Ashok Sharma
Byung Ha Lee
Jin-Xiong She
Richard A McIndoe
Ammon B Peck
Augusta University · USUniversity of Florida · USFlorida College · US

Funding

NRSA Institutional Training Program in Oral BiologyT32DE007200 · NIDCR · UNIVERSITY OF FLORIDA · PI BURNE, ROBERT A · 1990 to 2010
$4.2M
IMMUNOLOGIC/GENETIC MECHANISMS IN RHEUMATIC DISEASEST32AR007603 · NIAMS · UNIVERSITY OF FLORIDA · PI REEVES, WESTLEY H · 1998 to 2014
$2.2M
Genetic Control of Autoimmune Exocrinopathy in NOD MiceR01DE014344 · NIDCR · UNIVERSITY OF FLORIDA · PI PECK, AMMON B · 2003 to 2007
$1.6M
NIAMS NIH HHS T32 AR007603NIDCR NIH HHS DE014344NIDCR NIH HHS R01 DE014344NIDCR NIH HHS T32 DE007200NIDCR NIH HHS T32 DE07200
6 · The paper itself

Abstract

introductionRecently, we reported the development of the C57BL/6.NOD-Aec1Aec2 mouse that carries two genetic intervals derived from the non-obese diabetic (NOD) mouse capable of conferring Sjögren's syndrome (SjS)-like disease in SjS-non-susceptible C57BL/6 mice. In an attempt to define the molecular bases underlying the onset of stomatitis sicca (xerostomia) in this C57BL/6.NOD-Aec1Aec2 mouse model, we have carried out a study using genomic microarray technology.

methodsBy means of oligonucleotide microarrays, gene expression profiles of salivary glands at 4, 8, 12, 16, and 20 weeks of age were generated for C57BL/6.NOD-Aec1Aec2 male mice. Using Linear Models for Microarray Analysis and B-statistics software, 480 genes were identified as being differentially expressed (P < 0.01 and Q < 0.0001) during the development of SjS-like disease in the salivary glands.

resultsThe 480 genes could be arranged into four clusters, with each cluster defining a unique pattern of temporal expression, while the individual genes within each cluster could be grouped according to related biological functions. By means of pair-wise analysis, temporal changes in transcript expressions provided profiles indicating that many additional genes are differentially expressed at specific time points during the development of disease. Multiple genes reportedly showing an association with autoimmunity and/or SjS, in either humans or mouse models, were found to exhibit differential expressions, both quantitatively and temporally. Selecting various families of genes associated with specific functions (for example, antibody production, complement, and chemokines), we noted that only a limited number of family members showed differential expressions and these correlated with specific phases of disease.

conclusionsTaking advantage of known functions of these genes, investigators can construct interactive gene pathways, leading to modeling of possible underlying events inducing salivary gland dysfunction. Thus, these different approaches to analyzing microarray data permit the identification of multiple sets of genes of interest whose expressions and expression profiles may correlate with molecular mechanisms, signaling pathways, and/or immunological processes involved in the development and onset of SjS.

Indexed as

Gene ExpressionAnimalsCluster AnalysisDisease Models, AnimalHumansMaleMiceMice, Inbred C57BLMice, Inbred NODOligonucleotide Array Sequence AnalysisReverse Transcriptase Polymerase Chain ReactionRNA, MessengerSalivary GlandsSjogren's SyndromeXerostomiaRNA, Messenger

Identifiers

PMID19379516
PMCPMC2688207
OpenAlexW1964543975

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.