Evidence map›Paper›PMID 19376934›Full record

ArticleThe Plant cell2009

GLK transcription factors coordinate expression of the photosynthetic apparatus in Arabidopsis.

Mark T Waters, Peng Wang, Muris Korkaric, Richard G Capper, Nigel J Saunders, Jane A Langdale

Open access · hybridAbstract read
In one paragraph

Article in The Plant cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 340 papers.

0numbers the graph read from it
0cells of the map it votes in
340citing papers in PubMed
9.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

340 citing papers in PubMed, 679 citations in OpenAlex.

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  17. Regulation of chloroplast biogenesis and differentiation.Journal of experimental botany · 2026
    Review
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280 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Mark T WatersDepartment of Plant Sciences, University of Oxford, Oxford, OX1 3RB, United Kingdom.
Peng Wang
Muris Korkaric
Richard G Capper
Nigel J Saunders
Jane A Langdale
University of Oxford · GBOxford Gene Technology (United Kingdom) · GB

Funding

Biotechnology and Biological Sciences Research Council BB/C500879/1
6 · The paper itself

Abstract

Chloroplasts of photosynthetic organisms harness light energy and convert it into chemical energy. In several land plants, GOLDEN2-LIKE (GLK) transcription factors are required for chloroplast development, as glk1 glk2 double mutants are pale green and deficient in the formation of the photosynthetic apparatus. We show here that glk1 glk2 double mutants of Arabidopsis thaliana accumulate abnormal levels of chlorophyll precursors and that constitutive GLK gene expression leads to increased accumulation of transcripts for antenna proteins and chlorophyll biosynthetic enzymes. To establish the primary targets of GLK gene action, an inducible expression system was used in combination with transcriptome analysis. Following induction, transcript pools were substantially enriched in genes involved in chlorophyll biosynthesis, light harvesting, and electron transport. Chromatin immunoprecipitation experiments confirmed the direct association of GLK1 protein with target gene promoters, revealing a putative regulatory cis-element. We show that GLK proteins influence photosynthetic gene expression independently of the phyB signaling pathway and that the two GLK genes are differentially responsive to plastid retrograde signals. These results suggest that GLK genes help to coregulate and synchronize the expression of a suite of nuclear photosynthetic genes and thus act to optimize photosynthetic capacity in varying environmental and developmental conditions.

Indexed as

ArabidopsisArabidopsis ProteinsChlorophyllChlorophyll Binding ProteinsChromatin ImmunoprecipitationGene Expression Regulation, PlantLight-Harvesting Protein ComplexesMutationPhenotypePhotosynthesisPhytochrome BPlastidsPromoter Regions, GeneticRNA, MessengerSignal TransductionTranscription FactorsArabidopsis ProteinsChlorophyllChlorophyll Binding ProteinsGLK1 protein, ArabidopsisGLK2 protein, ArabidopsisLhcb6 protein, ArabidopsisLight-Harvesting Protein ComplexesPHYB protein, ArabidopsisPhytochrome BRNA, MessengerTranscription Factors

Identifiers

PMID19376934
PMCPMC2685620
OpenAlexW2134738614

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.